Candidatus Protofrankia datiscae: FsymDg_4194
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Entry
FsymDg_4194 CDS
T01530
Name
(GenBank) AAA ATPase central domain protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
fsy
Candidatus Protofrankia datiscae
Pathway
fsy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
FsymDg_4194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fsy03019
]
FsymDg_4194
03009 Ribosome biogenesis [BR:
fsy03009
]
FsymDg_4194
04131 Membrane trafficking [BR:
fsy04131
]
FsymDg_4194
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fsy04147
]
FsymDg_4194
Messenger RNA biogenesis [BR:
fsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
FsymDg_4194
Ribosome biogenesis [BR:
fsy03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
FsymDg_4194
Membrane trafficking [BR:
fsy04131
]
SNARE
SNARE associated proteins
Others
FsymDg_4194
Autophagy
Aggrephagy
Other aggrephagy associated proteins
FsymDg_4194
Exosome [BR:
fsy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FsymDg_4194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Acetyltransf_1
Acetyltransf_7
AAA_22
Acetyltransf_10
AAA_16
AAA_5
RuvB_N
Vps4_C
bpMoxR
AAA_lid_3
AAA_14
AAA_28
AAA_2
AAA_33
AAA_24
TIP49
AAA_19
AAA_18
AAA_11
IPT
Mg_chelatase
DUF815
AAA_30
Zeta_toxin
TsaE
nSTAND3
AAA_17
SKI
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AEH11459
UniProt:
F8AX11
LinkDB
All DBs
Position
complement(4897057..4898331)
Genome browser
AA seq
424 aa
AA seq
DB search
MTNWHVRSYDTNDHTATVHLLEEVRADAEGPSFDLTDTVLALREGTPAVVAVTPDQFVGV
AVAKYERGYAQVIALAISPAWRYRGIGSALLQALENQLLHAGHRRITTLLAPGQFGELAF
RNRGFARTGLTLYEKYEPLRPVDVTTVERWGGTLLTAAEWHGLAGMADGKRLVEQRLLLP
IKENELAETYGLVTPTAMLLFGPPGTGKTSFARAVAARLEWPFVELLPSRLVAAGDGNLA
AELRTAITELMQVERVVVFIDEVDEIAQARDAVGPESQSVVNELLKAIPQFRSTPGRLLI
CATNSIAALDPAFVRPGRFDLILPVGPPDAPGRRLLLDRFLERIDNKQVDTEPVVTATEL
FTPADLAAMVQRAVAAAFLRAVDKGERLPVTTDDLLAAARSSRPTISAEELERFRADAKI
FTRS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaactggcacgtgcggtcctacgacaccaacgatcacactgcgacggtccatttg
cttgaggaggtcagagctgacgcggaaggaccatcctttgacctgaccgacacggttctc
gcgctgcgggagggcacccccgcggttgtcgccgtcacacctgaccagttcgtgggcgtc
gcggtcgcgaaatacgagcgcggatacgcccaggtgattgcgctggcaatttcgccggcc
tggcgctaccgggggatcggatccgccctcctacaagcgctggagaaccagttgctgcac
gccggacaccgtcgcatcacgacgctgctcgcaccggggcagttcggtgaactggccttc
cgcaaccggggattcgccaggaccgggctcacgctctacgagaagtacgaaccgctgcgg
ccggtggacgtcacgaccgtggaacgctggggcggcaccctgctcaccgcggccgaatgg
cacgggctggccggtatggccgacggcaagaggctggtggaacaacgcctgttgctgccc
atcaaggaaaacgaactggccgagacgtacgggctcgtcaccccgacggccatgctcctg
ttcgggccaccgggcaccggtaagacgtcgttcgcccgggcggtggcggcccgtctggag
tggccgttcgtggagctgctgccgtcccgactggtcgcggcgggcgacggcaacctcgcc
gccgaactgcgcacggccatcaccgagctcatgcaggtcgagcgggtggtggtcttcatc
gacgaggtcgacgagatcgcccaggccagggacgccgtcgggccggagagccagtccgtg
gtcaacgagctgctgaaggcgatcccccagttccgcagcaccccggggcgtctgctgatc
tgcgcgacgaactcgatcgcggcgctcgatccggccttcgtccgcccgggtcgtttcgat
ctcattctcccggtcggaccgccggacgcgcccgggcgccgcctgctgctcgaccgcttc
ctcgaacggatcgacaacaagcaggtggacaccgaaccggtggtcacggcgacggagctg
ttcacgccggccgacctcgccgccatggtccagcgggcggtggcggcggccttcctccgc
gcggtcgacaagggggagcggctgccggtgaccaccgacgacctgctcgccgcggcccgc
tcgtcacggcccaccatcagcgcggaggagctcgagcgcttccgcgccgacgcgaagatc
tttactcgtagctga
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