Candidatus Protofrankia datiscae: FsymDg_4284
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Entry
FsymDg_4284 CDS
T01530
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
fsy
Candidatus Protofrankia datiscae
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsy03400
]
FsymDg_4284
DNA repair and recombination proteins [BR:
fsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FsymDg_4284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
Lon_C
ChlI
AAA
AAA_16
AAA_22
AAA_24
DUF7125
AAA_5
nSTAND3
ALOG_dom
NTPase_1
AAA_19
ABC_tran
CobU
RecA
AAA_18
NACHT
Rad51
RsgA_GTPase
PCB_OB
AAA_29
cobW
DAP3
MMR_HSR1
AAA_28
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AEH11544
UniProt:
F8AXX1
LinkDB
All DBs
Position
5002293..5003744
Genome browser
AA seq
483 aa
AA seq
DB search
MSSRPPVPRPSTPGPSGSRVASGGFRCSGCGAEAVKWTGRCPRCQAWGTVEAQVPPARAA
HRVSSRNLTARPAAVVTAPARPMSDVDVTTARSRPTGVTELDRVLGGGFVPGAVVLLAGE
PGVGKSTLLLEVAARSATSGARALVVTGEESAAQVRLRAGRTGAVHPELWIAAETDLEAL
LTHVDEVRPKLLVVDSIQTITTAAAEGAAGGVTQVREVTAALIRAAKALDMATVIVGHVT
KDGTVAGPRLLEHLVDVVLHFEGERHSSLRLVRASKNRFGPSDEVGCFEMGDGGIRGVAD
PSGLFLSRWHDGGPMDGVAGTCVTVAVEGRRPLVAEVQALVASSAAAVPRRAVSGLDSAR
VAMILAVVERRGRIQLGKSDVYAATVGGVRLAEPAADLAIALATISSVEDRPIPGDLIAI
GEVGLAGEVRSVGAVRRRLTAAFRLGFRRALVPPDAGPAPEHMTTIEVCDLGQAIRHMYG
PGE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctcggcctcccgttccccgaccgagcacaccaggcccgtccggctctcgcgtc
gcctcgggcggcttccgatgcagcggatgcggcgctgaggccgtcaagtggaccggtcgc
tgtccgcgctgccaggcgtgggggacggtcgaggcacaggttccccccgcccgcgcggcc
caccgggtcagcagccgcaacctgacggcgcgacccgccgcggtggtcacggcgcccgca
cgtccgatgtcggatgtcgacgtcaccacggcccgcagccgtccgaccggcgtcaccgag
ctcgaccgggtgctcggcggtgggttcgtgcccggggcggtcgtcctgctggccggggag
ccgggcgtgggcaagtccacgctgctgctcgaggtcgccgcccgtagcgccacctccggc
gcgcgggcgctggtggtcaccggtgaggagtcggccgcgcaggtacggctgcgggcgggc
cgcaccggggcggtgcaccccgagctgtggatcgccgccgagaccgacctggaagccctc
ctcacccacgtcgacgaggtccgccccaaactgcttgtggttgactcgatacagaccatc
accaccgccgcggcggaaggcgccgccggcggggtcacccaggtccgggaggtgaccgcg
gccctgatccgggcggcgaaggcgctggacatggccaccgtcatcgtcggccacgtgacc
aaggacggcaccgttgccgggccgcgcctgctcgagcacctcgtcgacgtcgtcctgcac
ttcgagggcgagcgccactcgtccctgcgcctggtccgggcgagcaagaaccgcttcggt
ccgtccgacgaggtcggctgtttcgagatgggcgacggcggcatccgcggggtcgccgac
cccagcgggctgttcctgtcccgctggcacgacggcgggccgatggacggcgtggcgggc
acctgcgtgacggtcgccgtcgagggccgccggccgctggtggccgaggtgcaggcgctg
gtggcgagctcggccgcggccgtaccgcgccgggcggtctccgggctggactcggcgcgg
gtcgcgatgatcctcgccgtcgtggaacgccgtggccgcatccagctggggaagtcggac
gtctacgcggcgaccgtcggcggtgtccggctcgccgaaccggccgccgacctggcgatc
gcgctggccacgatcagcagtgtcgaggaccgccccatccccggcgacctgatagcgata
ggtgaggtcggcctggccggcgaggtccgctcggtgggcgcggtccgccggcggctgacc
gcggccttcagactcggcttccggcgggcgctggtacctccggacgccggcccggcgccc
gagcacatgacgacgatcgaggtttgcgacctgggccaggcgatacggcacatgtacggc
ccaggcgaatga
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