Candidatus Protofrankia datiscae: FsymDg_4286
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Entry
FsymDg_4286 CDS
T01530
Name
(GenBank) HhH-GPD family protein
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
fsy
Candidatus Protofrankia datiscae
Pathway
fsy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FsymDg_4286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsy03400
]
FsymDg_4286
Enzymes [BR:
fsy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
FsymDg_4286
DNA repair and recombination proteins [BR:
fsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FsymDg_4286
Prokaryotic type
FsymDg_4286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
TPR_10
Motif
Other DBs
NCBI-ProteinID:
AEH11546
UniProt:
F8AXX3
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All DBs
Position
5005144..5006217
Genome browser
AA seq
357 aa
AA seq
DB search
MASTASPTATSASVTTAAADAAAVADAADAVSVDAAEPAAVAPVAATAARPGPGASTAFA
DAVLEWYATHARDLPWRHPEASPWAVLVSEIMLQQTPVNRVLPAWQAWLDRWPAPSALAA
EPAGEAVRMWGRLGYPRRALRLHQAAVAITEEHHGLVPDDLEHLLRLPGVGTYTARAVAA
FAFRQRHAVIDVNVRRLVGRAVNGRDDQRTAVSRRDLELVESLLPHDAESAAQASAAFME
LGALLCVARTPRCEACPLRRECAWRRAGSPAAADTGRRTQSYAGTDRQVRGKLLAVLRES
PVPVPQDVLDTVWDEPVQRGRALHGLLDDGLVVAVAPGVYALPGEQAWPGVRSPSGG
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaccgcctctcccacggccacctcggcatccgtgaccactgccgcggccgat
gcggccgccgtagccgatgcggccgacgcggtgtcggtcgacgcggccgaaccggccgct
gtggcacccgtggccgccacggctgccaggcccggccccggggcttcgacggcgttcgcc
gacgccgtcctcgagtggtacgcgacccatgcccgtgacctcccctggcggcacccggag
gcgagcccctgggcggttctcgtcagcgagatcatgctgcagcagacgccggtgaaccgg
gtgctgccggcatggcaggcctggctggaccgctggcccgccccgtcggcgctcgccgcg
gagccggccggcgaggccgtccgcatgtgggggcgcctgggctatccgcgccgggcgctg
cggctgcaccaggccgcggtggccatcacggaggagcaccatgggctggttcccgacgac
ctggagcatctgcttcggctgccgggagtggggacctacaccgccagagcggtcgccgcg
ttcgccttccgtcagcgccacgctgtgatcgacgtcaatgtccggcggctcgtcggccgg
gccgtcaacggccgcgacgaccagcgaacggccgtgtcacgccgggacctcgaactggtc
gagtccctgctgccccacgacgcagagagcgcggctcaggccagcgccgcgttcatggag
ctcggtgcgctgctctgtgtcgcgcgtaccccccggtgcgaggcctgcccgctgcggcgg
gagtgcgcctggcggcgggcgggcagcccggccgccgcggacacgggccgacgcacgcag
agctacgccgggaccgaccggcaggtacgcggaaagctgctcgcggtgctgcgcgagtca
cccgtcccggtgccgcaggacgtcctggacaccgtgtgggacgagcccgtacagcgcggc
cgtgcgctgcacggcctgctcgacgacggcctcgtcgtcgcggtcgcgcccggtgtgtac
gccctgcccggcgaacaggcctggcccggcgtgcgcagcccatccggcggatag
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