Francisella tularensis subsp. holarctica FTNF002-00: FTA_0704
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Entry
FTA_0704 CDS
T00584
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
fta
Francisella tularensis subsp. holarctica FTNF002-00
Pathway
fta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FTA_0704 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fta03400
]
FTA_0704 (recB)
Enzymes [BR:
fta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FTA_0704 (recB)
DNA repair and recombination proteins [BR:
fta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FTA_0704 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
Cucumo_coat
Lys
Helicase_RecD
bMERB_dom
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABU61180
LinkDB
All DBs
Position
655514..659167
Genome browser
AA seq
1217 aa
AA seq
DB search
MDNLNANTITLQGRHIIEASAGTGKTFNITKLYIRLLLEKKLLPSNILVMTFTKDATQEI
IGRVEKEIRDVLASYTDEKKESDKENYKHLKRSLLEIDEAAIFTIHGFCKKVLSEQAFAS
GIEMDVSMEVDTSDIFQKVVEDFFRKHINKSETNFGYLQIYKLHTPEKFLDDLENIIRSN
YEILTKQAISLDEFKILKKQQLELFINNHDIVDDFLYKLGKGEPQGKRVDEYHRVLEWLK
LDNQTLFPENISIITDGRKISAKLIKPIFIGVKELRDLQQEIKQAQAAQFIRKACLQIRQ
DFAKAKDQKGVLDFDDLITKLCQSVKKSPELVKTLQKQYPVALIDEFQDTDAEQYEILDT
IYPLKNSSSHSHKGKNLLTNGLNLKDTRLREYDSSSDQNDSNLLLLMIGDPKQAIYGFRG
GDIFTYLKAKDSCPEENQWSMDTNWRSTGEMIKAYNRLFYKQDYQSEEEGQIGTNIFSDG
IGYQLVKASPDADKKTKDFDDNFKPINYFYYEVAEDDNKSDIDTNLALWTVNEITRLLNT
QKVAENDIAILVENGKQAKIIQQALQAKNLSSVYLSQRDNVYHSQEAKEILALMEGINDL
ENKSMLKRALSTSLLGGRADKFISYIDENDVSAWDDEIEKAKSLRQQWHKYGFMAFIMQI
IHENFTQKADSKERIITNILHLAELIKVAENKYKHPNQLIKWYRHQLNNTATSEGELRLE
SDDNLIKIITIHGSKGLEYSVVFIPFACYASTKKFETSNFTKYYDGDLKQTVYKIGKDDS
VKQQADKEVIEELMRLFYVAVTRAEHRCYIGVAKYNNSEKSPLARFLGYQKDDDWLEKIQ
SITANPANQSLLINIADMREFSLKNLSSKDKNSDYDTLKANYISKLENDSWEMLSFSKIS
KSKVQNTALEKEIDEAEDDKTQASDRKLAFRFTASKGADMGNILHNVLEHTDFSLGEIDG
NLLQEQMDRYKVVAAEDFDNLKLWLEECLEAHIPYIDTSFSSLNESIQYGLFDIKDKGFC
LKTIPNSKTLKEAEFYFPVKNENLYKTNILEILQEYRELTKLKTYSHSYVGGNLPTNYQD
LRDTRLREYGNLTNVSNQKIFGMLHGFIDLIFEYEGKFYVADYKSNYLGDTLEDYNQQAM
QEKNQSSFYDLQYLIYSVALDKYLRQNIESYNYEKHFGGVYYFYLRGMKDGYGVYRARPN
LEIINKLASLFNGDDNV
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggacaacctaaacgcaaacacaataactctacaaggtcgccatattatcgaggcaagt
gctggtactggtaagacttttaatattactaagttgtatatccgacttttgctagaaaaa
aaattattgccaagtaatatccttgtaatgacctttaccaaagatgcaacccaagagatt
attggtagagttgaaaaagagattcgagatgtattagcaagttatacagatgagaaaaag
gagtctgacaaagaaaactacaaacatctaaaaagatcattacttgagatagatgaggca
gctatatttactatccatggtttttgtaaaaaagtcttaagtgagcaagcctttgctagc
ggtatcgagatggatgtctctatggaggttgatacttcagatatttttcaaaaggttgta
gaggattttttcagaaaacatatcaataaaagcgaaactaattttggatatttacaaata
tataaattacatactccagagaaatttttagatgaccttgagaatattattaggtctaat
tatgagattttaacaaagcaagctataagcttagacgaatttaagatactcaaaaaacaa
cagttagaattatttattaataatcacgatatcgtagatgatttcttatataaattagga
aaaggtgagccacagggcaagagagtagatgagtatcatagggttttagaatggttgaaa
ttagataatcaaacactattcccagagaatatttctataattacagatggcagaaagata
agtgcaaaactaataaaaccaatttttattggcgtaaaagaattaagagacctgcaacaa
gaaataaaacaagcacaagcagcacaatttatcagaaaagcatgcttgcaaatccgccaa
gattttgcaaaggcaaaagatcaaaagggtgttttagactttgatgatttgattaccaag
ctttgccaaagtgtcaaaaaatcgccagagttagtcaaaactttgcaaaaacaatatcca
gttgctcttatagatgagtttcaagatactgatgctgagcagtatgagatattagatact
atttatcctttgaagaatagtagtagtcattcccacaaaggtaagaatctccttaccaat
ggattaaatttaaaagatacccgcttacgcgagtatgacagtagttctgatcagaacgat
agcaatcttctgctcttaatgataggcgatccaaaacaggcaatttatggctttagaggt
ggagatatcttcacatatctaaaagctaaagatagttgtccagaagaaaatcaatggagt
atggacaccaactggcgttcaactggagagatgataaaagcttataatagacttttttat
aaacaagattatcagtcagaagaagaggggcaaattggaactaatatttttagtgatggt
attggatatcagcttgtcaaagcttcaccggatgctgataaaaaaacaaaagattttgac
gataattttaaacctattaattatttctattatgaagtagccgaagatgataataaaagt
gatattgatacgaatttagcattatggacagtaaatgaaattactagattactaaataca
caaaaagtagcagaaaatgatatagctattttggtagaaaatggcaaacaggcaaagatt
atccaacaagctttgcaagctaaaaatctaagctcagtatacctaagccagcgcgataat
gtctatcacagtcaagaggctaaagagatcttagctcttatggagggtataaatgatctt
gaaaataaatctatgttgaaaagggcattatcgactagtttactcggtggtagagctgat
aagtttattagctatattgatgaaaatgatgtctcagcgtgggatgatgagatagaaaaa
gccaaatctctaaggcaacaatggcataaatatggatttatggcatttattatgcagatt
atacatgagaatttcactcaaaaagcagattcaaaagagcgtattattacaaatattctt
catttagcagaacttattaaagtggctgagaataaatataaacaccctaatcaactcatt
aaatggtatcgccaccaactcaacaatacagctacaagtgagggtgaacttagattagaa
agtgatgacaacttgattaagataattacaatccatggatcaaaaggacttgagtattca
gttgtgtttatcccgtttgcttgctatgcaagcacaaagaagtttgagacaagtaatttt
actaaatattatgatggtgacctaaaacaaactgtctacaaaattggcaaagatgatagt
gtgaaacagcaagctgataaagaggttatagaagaattaatgcgtctattttatgtagct
gttacgcgtgcagagcatagatgttatattggggttgcaaaatataataatagcgaaaag
tcaccattagcaagattcttaggttatcaaaaagatgatgattggttagagaagatccaa
agcataacagcaaatcctgctaatcaaagtctactgataaatattgcagatatgcgggaa
tttagtttaaaaaatttatctagcaaagataaaaattctgattatgatactctcaaagca
aattatattagtaaactagaaaatgatagttgggagatgttatctttctcaaaaatatca
aagtcaaaagttcaaaatactgcattagaaaaagaaattgacgaggcagaagatgataaa
actcaagcttcagacagaaagctagcatttagatttacagcttcaaaaggagctgatatg
ggtaatattctgcataatgttttagagcatacagattttagtttaggtgagatagatggt
aatcttttacaagaacaaatggatagatataaagtagttgctgcagaagacttcgataat
cttaaattatggttggaagaatgtttagaagcacatataccttatatagataccagtttt
tctagcttaaatgagagtattcaatatggtttatttgatatcaaggataaaggcttttgc
ttaaaaactatcccaaattcgaaaactctaaaagaggcggagttttattttcctgttaaa
aatgagaatttgtataaaacaaatatattagaaatcttgcaagagtatagagagcttaca
aaactgaagacatatagtcattcctatgtaggtgggaatcttccaactaactaccaagat
ctaagagatacccgcctccgcgagtatggcaatttaactaatgtttcgaatcaaaaaatt
tttggtatgcttcatggttttatagatcttatttttgagtatgagggtaaattttatgtt
gctgattataaatcaaattatctaggtgatactttagaagattataatcagcaggcgatg
caagagaaaaatcaaagtagcttttatgatttacagtatctaatatatagcgttgccttg
gataagtacctgcgacaaaacattgaaagttataattatgaaaagcattttggcggagta
tattatttttatcttagaggtatgaaagatggttatggagtttatcgagctagaccaaat
ttagagattatcaacaaacttgctagtttatttaatggagatgataatgtataa
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