Francisella tularensis subsp. holarctica FTNF002-00: FTA_1324
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Entry
FTA_1324 CDS
T00584
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
fta
Francisella tularensis subsp. holarctica FTNF002-00
Pathway
fta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FTA_1324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fta03019
]
FTA_1324
Enzymes [BR:
fta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FTA_1324
Messenger RNA biogenesis [BR:
fta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FTA_1324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
MerR-DNA-bind
P-loop_SecA
Flavi_DEAD
HI1480
RELT
Motif
Other DBs
NCBI-ProteinID:
ABU61799
LinkDB
All DBs
Position
complement(1196707..1198032)
Genome browser
AA seq
441 aa
AA seq
DB search
MKFSDLGLNSLICNALEKKGYTKPTPIQAQAIPIVLKGNDVMASAQTGTGKTAGFTLPII
QRLLDQPKAQANRIKTLILTPTRELAAQIQEQIQIYAANTHIRSAVIFGGVSNNPQMMKL
RKGVEILIATPGRLLDLYSQNAVKFDSLNTFVLDEADRMLDMGFINDLKKIHNLLPKKLQ
TLMFSATFSSEIKNLANEFLNNPQFVSADVVNTTVKKITQKIYTLDKSNKINALISLIKD
QNLHQVLVFSRTKNGANKISEKLNNAGISSSAIHGNKSQTARTKALADFKSNDINVLVAT
DIAARGIDIAQLPCVINLDLSNVAEDYVHRIGRTGRAGQEGLAISLVSADEVESLSNIEH
LIGHLLPREELEGFEATHNVPITSMSHKNKAKKIDEVKIIAAKRAKKNNNNKKPSNKNDF
AKKIRQKIHQNKSVRKPKAKD
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaaattctcagatttaggtttaaattccttaatatgtaacgctttagaaaagaagggt
tatacaaaaccaactcctattcaagcacaagcgataccaatagttctaaagggtaatgat
gttatggcatcagctcaaacaggaacaggaaaaacagcaggctttacattaccaattatc
caaagacttcttgatcaacccaaagctcaagcaaataggatcaaaacattaatcctaact
cctacaagagagttagcagcacaaatacaagaacaaattcaaatatatgccgcaaataca
catattcgttcagcagtaatatttggtggagtaagtaataatcctcaaatgatgaaatta
cgtaaaggtgtcgagattttgatagctactcctggaagattacttgacttatatagtcaa
aatgctgtcaagtttgatagtttaaatacctttgttttagatgaagcagacagaatgtta
gatatgggtttcattaatgatttaaaaaaaatccataaccttttaccgaaaaagttacaa
acactaatgttctcagcaacattttcatcagagataaaaaatcttgctaatgaatttcta
aataatccccagtttgtatcagctgatgttgtaaatacgacggtcaaaaagattactcag
aaaatttatacattagataaatcaaataaaattaatgcgctaatctcactaataaaagat
cagaatctacatcaagtactagttttctcgcggactaaaaatggagcaaataaaatctcg
gaaaagttaaataatgctggcattagtagtagtgctattcatggtaataaaagtcaaact
gctcgtactaaagctttagctgattttaaatctaatgatataaatgtcttagttgctact
gatattgcagctcgtggaattgatattgcccaacttccttgtgtgataaatcttgattta
tcaaatgtcgctgaagactatgtccatagaataggtagaactggcagagcaggacaagag
ggtttagcaatttctcttgtaagtgctgatgaagtcgaatctttatcaaacattgaacat
ctgatcgggcatcttttaccacgagaggaactagaaggctttgaggcaactcataatgta
cctataacaagtatgtcacacaaaaacaaagctaagaaaatcgatgaagttaagataata
gctgcaaaaagagcaaaaaagaacaataacaacaaaaaaccttctaataagaatgatttt
gctaaaaaaattagacaaaaaatacatcaaaataaaagtgttagaaaaccaaaggcaaaa
gattaa
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