Francisella tularensis subsp. holarctica FTNF002-00: FTA_1479
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Entry
FTA_1479 CDS
T00584
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fta
Francisella tularensis subsp. holarctica FTNF002-00
Pathway
fta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FTA_1479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fta03019
]
FTA_1479
03009 Ribosome biogenesis [BR:
fta03009
]
FTA_1479
Enzymes [BR:
fta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FTA_1479
Messenger RNA biogenesis [BR:
fta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FTA_1479
Ribosome biogenesis [BR:
fta03009
]
Prokaryotic type
rRNA helicases
FTA_1479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_30
Utp25_C
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ABU61954
LinkDB
All DBs
Position
complement(1321280..1322989)
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AA seq
569 aa
AA seq
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MNSETKKDFSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAA
FALPLINNMDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQEYGS
QIRALKQGVKVVVGTTGRVMDHIEKGTLQLDNLRALVLDEADEMLRMGFIDDVQFVLSHV
SEQCQRLLFSATIPTDIADIIEEYLRNPCKIQVKAKTKTANTVTQKFIVIKGFRKIDALD
RLLETEETDGVIIFVKTKTSTIEVADNLKALGYKVAAINGDMQQSQREYIVDQFRSAKSD
ILVATDVVARGIDLERISHVINYDMPNDTDTYVHRIGRTGRAGREGTSISLVPLKEMRFL
RTLERFTGSPMQEVFMPSAKDLAQSRVEHFKARIISALDKNKSLDKYKEIITSIRYELQL
DSEELLAGLTLLAQGKKTFFPREIQAKEEKPARDNRNSRDGRRNERFERRNDQGDRTKRF
DKADRKPRRAVNIDLTTYKLDVGRDNDVQARNIVGAIANEGNIDSKHICNISIQKDYTLV
DLPANLSPKVINHLKKVWVAGKKLNLTAQ
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgaaactaaaaaagattttagtcagcttgggctgaatcaagatattgtagat
actgttattaaactaggatatgaaaatccaacacctatccaacagtatgctattccatat
atcttatcaggtagagatgtgctaggtcaagcacaaacgggtacgggcaaaacagcagct
tttgcattacctctaataaataacatggacttggcatctagagatagagctccacaagtt
ttggtactagcacctacaagagagttagctatacaagtggcggagcagtttgaagctttt
gctaaaaatgtacctaatttagatgttgcttgtatttatggtggtcaagaatatggttct
caaataagagcacttaagcaaggtgtaaaagttgtagttggtacaactggtcgagtaatg
gatcatattgagaaaggtacattacagcttgataatcttagagcattagtattagatgaa
gcagatgagatgctcagaatgggctttattgatgatgttcaatttgtcttaagtcatgtt
tctgaacaatgccaaagattacttttctcagcaacaattcctactgatattgctgatatt
atcgaagaatatctaagaaatccttgtaagatacaagtgaaagcgaaaacaaaaactgct
aatacagtgacacaaaaatttatcgtcattaaaggctttagaaagatagatgctttagat
aggttgcttgagaccgaagaaactgacggtgttattatctttgttaagactaagacaagt
actatagaagtagcagataatttaaaagctcttggctataaagtagcagctataaatggc
gatatgcaacaatcacagcgtgagtatattgttgatcaattcagaagtgctaaatccgat
atcctcgttgctacagatgtagtagctaggggtatagatcttgaacgtattagtcatgtg
attaactatgatatgcctaatgatactgatacatatgtacatagaattgggcgtacaggt
agagcagggcgtgaaggcacgtcaatttctttagtacctcttaaagagatgagattttta
cgtactttagagagatttacaggttcaccaatgcaagaagtatttatgccaagtgctaaa
gatttagctcaaagcagggtagaacactttaaagctagaataatctcagcattggataaa
aataagtctttagataagtataaagaaattattacaagtattcgttatgaattacagtta
gactcagaagagcttttagctggacttacattactagctcaaggtaagaaaactttcttc
ccaagagaaattcaagctaaagaagaaaaaccagctcgtgataatagaaattctagagat
ggtagaagaaatgaaagatttgagcgtagaaatgatcaaggtgatagaactaaacgtttt
gataaagcagatagaaagccacgtcgtgctgtaaatatcgatctaactacttataagtta
gatgttggtcgtgataatgatgttcaagcgcgaaatattgttggtgctatagctaatgag
ggtaatatcgatagtaaacatatctgtaatatctctattcaaaaagattatacattagtt
gatttaccagcaaatctttcaccaaaagtgataaatcatctaaaaaaagtttgggttgct
gggaagaagttaaatcttactgctcagtaa
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