Francisella tularensis subsp. holarctica FTNF002-00: FTA_1848
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Entry
FTA_1848 CDS
T00584
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
fta
Francisella tularensis subsp. holarctica FTNF002-00
Pathway
fta03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fta00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FTA_1848 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fta03021
]
FTA_1848 (rpoB)
03400 DNA repair and recombination proteins [BR:
fta03400
]
FTA_1848 (rpoB)
Enzymes [BR:
fta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FTA_1848 (rpoB)
Transcription machinery [BR:
fta03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FTA_1848 (rpoB)
DNA repair and recombination proteins [BR:
fta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FTA_1848 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
Motif
Other DBs
NCBI-ProteinID:
ABU62323
UniProt:
A7NEC0
LinkDB
All DBs
Position
complement(1673098..1677183)
Genome browser
AA seq
1361 aa
AA seq
DB search
MFLMSYSYAEKKRIRKEFGVLPHILDVPYLLSIQTESYKKFLTVDAAKGRLHSGLEIVLK
QSFPVESKNGQYELHYVDYQIGEPTFDETECQVRGATYDAPLNVKLRLVVYNKDALPNEK
IVEDIREEYVYMGDIPLMTTNGTFIINGTERVVVSQLHRSPGVFFSKDDSEEGAFSARII
PYRGSWLDFEFDSKGIIWARIDRKRKFCATVILKALGYTQEQILENFSESKTITFNSKGF
ALRLDNLSNMKGELLKFDIVDAQDNVIVKKNKKLTSRDVKKIKDAGVDSVAIDFDLVSTL
RVAKDIVNEATGEVIAYANDDVTESLLESCVEVGMLELEVIDFITTERGRYISDTLKYDL
TRNTDEALVEIYKVLRPGDPPAAASVKALFEGLFFIESRYSLSDIGRMKLNARLGSDKVS
KDIYTLENSDIVGVIEELINIRDGKGKVDDIDHLGNRRVRSVGEMVENQFRIGLYRVEKG
IRESMSLVHKDKLMPKDIVNSKPITAAIKEFFTSGALSQFMDQDNPLSEVTHKRRISALG
PGGLSRDRAGFEVRDVHATHYGRLCPIETPEGPNIGLINSLASYARVNDYGFLEAPYRKV
VDGKVTDEIEYLSAIDEDNYVIAQASTKLDENNHFVEDIIQCRSGGEAIFTESSRVQYMD
VSAKQMVSAAAALIPFLEHDDANRVLMGANMQRQAVPTLKSEKPLVGTGMEKIVARDSGN
CIIARNVGEVAEVDSNRIVIKVDTEKSQTSNLVDIYSLTKFKRSNKNTCINQRPIVNVGD
KVEAGDILADGFATDFGELSLGHNLMVAFMPWNGYNFEDSILLSERIVKDDKYTSIHIEE
FTCVARDTKLGPEEITADIPNVSESSLAKLDESGIVHIGANVEAGDILVAKITPKAEQQL
TPEERLLRAIFNEKASNVVDSSLRMPSGTSGTVISVQVFENDKGGKSKRALKIEKELIDK
ARKDFDEEFAVIESVVKSSIEQEVVGAKIQKAKGLKKGAILTKEFLATLPLSKWLEISFE
DEKLEEKVQNAREYYEEAKIAIDAKFEAKKKSITQSNELSPGVLKTVKVFVAIKKRIQPG
DKMAGRHGNKGVVSRVLPVEDMPYMEDGTPVDVCLNPLGIPSRMNIGQILEAHLGLASYG
LGKKIEKTLEKTRKAAELRKTLEEVYNSVGDKKVNLEALNDEEILTLCDNLKGGVPIATP
VFDGAKEEDIKSLLKIGGFATNGQMKLFDGRTGKPFDRHVTVGYMYMLKLDHLVDDKMHA
RSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALQAYGAAYTLREMLTVKSDDIAGRSKMY
KNIVDGKLTMNVDVPESFNVLRNEVRALGIDMDFDYSSEEE
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgatgtcttactcatacgctgagaaaaaaagaattcgtaaagagtttggggtt
cttcctcatatcttagatgtaccatatttgctttctattcaaacagagtcatacaaaaaa
ttcttgactgtagatgcagcaaaaggaagacttcactctggacttgaaatagttttaaaa
cagtcttttcctgttgagagtaaaaatggtcaatatgaacttcactatgttgattatcaa
attggtgagcctacttttgatgaaactgaatgtcaggttcgtggtgctacttatgatgca
ccattaaatgtgaagttaagattagttgtatataataaagatgctcttccaaatgagaaa
attgtcgaggacattagagaagagtatgtgtacatgggcgatattccgctaatgacaact
aatggtacttttatcattaatgggacagaaagagtagtagtctctcagttgcatagatca
ccaggggtgttctttagtaaggatgactctgaggaaggagcattctcagcacgtattatc
ccatatagaggctcatggcttgattttgaatttgactcaaaaggtattatatgggctagg
attgatagaaaaagaaaattctgtgctacagttattttaaaagctcttggttatactcaa
gagcaaatattagagaatttttctgagagtaagactattacttttaatagtaaaggtttt
gctcttagacttgataacctttcaaatatgaaaggtgagctgcttaagtttgacattgta
gatgctcaagataatgttattgttaaaaagaataaaaaattaacttcaagagatgttaag
aaaattaaagatgcaggcgttgactctgtagctattgattttgatttggtcagcactctt
agagttgcaaaagatatcgttaatgaagcaacaggtgaagtgatagcttatgctaatgac
gatgttacagaaagtttattagagtcatgcgtagaagttggcatgcttgaattagaagtt
attgattttataactactgaaagaggtaggtatatatctgatactttaaaatatgatctt
acaagaaatactgatgaggcacttgtcgagatatataaggtattacgaccaggtgatcct
cctgcagcagcttcagttaaagcattatttgaaggtttattctttattgaaagtagatat
agcctttctgatattggtagaatgaagctaaatgctagattaggttcggataaggtatct
aaagatatctatactttagaaaatagtgatatagttggcgtaattgaagagcttataaat
atccgtgatggtaaaggtaaagttgatgatattgatcatttaggtaacagacgtgtacgt
tctgttggcgagatggttgagaatcagtttagaataggcctctaccgtgtagagaaaggt
attcgtgaaagtatgtctttagtacataaagataagcttatgccaaaagatatcgttaac
tcgaagccaatcacagcagcaattaaagaattctttacttctggagcgttatcacaattt
atggatcaagataacccattgtcagaagttacacataagcgtagaatatctgcattaggt
ccaggtggtttatcacgtgatagagcaggttttgaagtacgtgatgttcatgcaacacac
tatggtagattatgtccaattgagactccagaaggtccaaatattggtctaattaactca
ttagcaagttatgctcgtgttaatgattatggtttcttagaagcaccatatcgaaaagtt
gttgatggtaaggttacagatgaaattgaatacttatctgctatcgatgaagataattat
gtaattgctcaagcatcaactaaacttgatgaaaataaccattttgttgaagatattatt
caatgtcgttctggaggtgaggcaatatttactgagtcaagtagagttcagtatatggat
gtttctgctaaacagatggtttcagcagctgcggcactaattcctttccttgagcatgat
gatgctaacagggtattgatgggtgcaaacatgcaacgtcaagcggtaccgactcttaaa
tctgagaagcctttagtcggtacaggtatggagaagattgttgctagagattctggtaat
tgtattatcgcaagaaatgttggtgaagtggctgaagttgattctaacagaatcgttatt
aaagtagatactgaaaaatcacaaactagtaatttggttgatatttatagtttaactaaa
tttaaacgctcaaacaaaaatacttgtattaaccagcgtccaatagtaaatgtgggtgat
aaagtagaagctggtgatattttagcggatggttttgcaactgattttggtgaattgtca
ctagggcataacttgatggttgcttttatgccatggaatggttataactttgaggattcg
atcttactatctgaaagaatagtaaaagatgataagtatactagtatccatattgaagag
ttcacatgtgtggctcgtgatactaagcttggtcctgaagagataactgcagatattcca
aatgttagtgagtctagtttggcaaaacttgatgaatcaggtatcgtccatattggcgct
aatgtcgaagcaggcgatattttggtagctaagattactccaaaagctgagcaacaacta
actcctgaagagagactacttagagcaatctttaatgaaaaagcatcaaatgttgttgat
agttcattaagaatgccaagtggtacttctggtacggttattagtgttcaagtatttgag
aatgacaaaggtggtaaaagtaagcgagctcttaagattgaaaaagaactgatcgataaa
gctcgtaaggattttgatgaggagtttgcagtaattgaatctgtagttaaatcatcaatt
gagcaagaagttgttggtgcaaaaatccaaaaagcaaaaggtcttaaaaaaggtgctatc
cttacaaaagaatttttagcaacactacctttatctaaatggctagaaatttcttttgag
gatgagaaacttgaagagaaagttcaaaacgctagagagtattatgaggaagctaaaatt
gctatagatgctaaatttgaagctaagaaaaaatctattactcagagtaatgagctatct
ccaggtgtgcttaagactgttaaagtttttgttgcgattaaaaagcgtatccagccaggt
gataagatggctggtcgtcatggtaacaaaggtgtggtttcacgcgtattaccagttgaa
gatatgccatatatggaagatggtactcctgtagacgtttgtctaaatcctttaggtatc
ccatcacgtatgaacattgggcagattttagaagcacacttaggattggcttcatatggt
ttaggtaaaaaaatcgaaaaaactttagagaaaactagaaaagcagctgaactaagaaag
actttagaagaagtatataatagcgttggcgataagaaagttaatcttgaggctttaaat
gacgaagagatactaactctttgtgacaacctaaaaggtggagtaccaatcgctacacca
gtatttgatggtgctaaagaagaagatattaaatcactactgaaaataggcggctttgca
actaatggtcagatgaagctttttgatggtcgtactggtaagccttttgatagacatgta
actgttggttatatgtatatgctaaaactagatcacttagtagatgataagatgcatgca
agatcgactggctcatatagtctagttacgcagcaaccattaggtggtaaagcacagttt
ggtggacaaagattcggtgagatggaagtttgggcattacaagcatatggtgctgcttat
acattaagagagatgctaacagttaagtcagatgacatagcaggtagatctaaaatgtat
aagaatatagttgatggtaagttgactatgaatgtagatgttccagaatcattcaatgtt
ttaagaaatgaagttagagcattgggtatagatatggattttgactattcatctgaggaa
gaataa
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