Francisella tularensis subsp. holarctica FTT_1: DA46_1366
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Entry
DA46_1366 CDS
T03713
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ftc
Francisella tularensis subsp. holarctica FTT_1
Pathway
ftc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ftc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DA46_1366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ftc03019
]
DA46_1366
03009 Ribosome biogenesis [BR:
ftc03009
]
DA46_1366
Enzymes [BR:
ftc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DA46_1366
Messenger RNA biogenesis [BR:
ftc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DA46_1366
Ribosome biogenesis [BR:
ftc03009
]
Prokaryotic type
rRNA helicases
DA46_1366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_30
Utp25_C
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AJI51654
UniProt:
A0A0B3VEE0
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All DBs
Position
1233727..1235436
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AA seq
569 aa
AA seq
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MNSETKKDFSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAA
FALPLINNMDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQEYGS
QIRALKQGVKVVVGTTGRVMDHIEKGTLQLDNLRALVLDEADEMLRMGFIDDVQFVLSHV
SEQCQRLLFSATIPTDIADIIEEYLRNPCKIQVKAKTKTANTVTQKFIVIKGFRKIDALD
RLLETEETDGVIIFVKTKTSTIEVADNLKALGYKVAAINGDMQQSQREYIVDQFRSAKSD
ILVATDVVARGIDLERISHVINYDMPNDTDTYVHRIGRTGRAGREGTSISLVPLKEMRFL
RTLERFTGSPMQEVFMPSAKDLAQSRVEHFKARIISALDKNKSLDKYKEIITSIRYELQL
DSEELLAGLTLLAQGKKTFFPREIQAKEEKPARDNRNSRDGRRNERFERRNDQGDRTKRF
DKADRKPRRAVNIDLTTYKLDVGRDNDVQARNIVGAIANEGNIDSKHICNISIQKDYTLV
DLPANLSPKVINHLKKVWVAGKKLNLTAQ
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgaaactaaaaaagattttagtcagcttgggctgaatcaagatattgtagat
actgttattaaactaggatatgaaaatccaacacctatccaacagtatgctattccatat
atcttatcaggtagagatgtgctaggtcaagcacaaacgggtacgggcaaaacagcagct
tttgcattacctctaataaataacatggacttggcatctagagatagagctccacaagtt
ttggtactagcacctacaagagagttagctatacaagtggcggagcagtttgaagctttt
gctaaaaatgtacctaatttagatgttgcttgtatttatggtggtcaagaatatggttct
caaataagagcacttaagcaaggtgtaaaagttgtagttggtacaactggtcgagtaatg
gatcatattgagaaaggtacattacagcttgataatcttagagcattagtattagatgaa
gcagatgagatgctcagaatgggctttattgatgatgttcaatttgtcttaagtcatgtt
tctgaacaatgccaaagattacttttctcagcaacaattcctactgatattgctgatatt
atcgaagaatatctaagaaatccttgtaagatacaagtgaaagcgaaaacaaaaactgct
aatacagtgacacaaaaatttatcgtcattaaaggctttagaaagatagatgctttagat
aggttgcttgagaccgaagaaactgacggtgttattatctttgttaagactaagacaagt
actatagaagtagcagataatttaaaagctcttggctataaagtagcagctataaatggc
gatatgcaacaatcacagcgtgagtatattgttgatcaattcagaagtgctaaatccgat
atcctcgttgctacagatgtagtagctaggggtatagatcttgaacgtattagtcatgtg
attaactatgatatgcctaatgatactgatacatatgtacatagaattgggcgtacaggt
agagcagggcgtgaaggcacgtcaatttctttagtacctcttaaagagatgagattttta
cgtactttagagagatttacaggttcaccaatgcaagaagtatttatgccaagtgctaaa
gatttagctcaaagcagggtagaacactttaaagctagaataatctcagcattggataaa
aataagtctttagataagtataaagaaattattacaagtattcgttatgaattacagtta
gactcagaagagcttttagctggacttacattactagctcaaggtaagaaaactttcttc
ccaagagaaattcaagctaaagaagaaaaaccagctcgtgataatagaaattctagagat
ggtagaagaaatgaaagatttgagcgtagaaatgatcaaggtgatagaactaaacgtttt
gataaagcagatagaaagccacgtcgtgctgtaaatatcgatctaactacttataagtta
gatgttggtcgtgataatgatgttcaagcgcgaaatattgttggtgctatagctaatgag
ggtaatatcgatagtaaacatatctgtaatatctctattcaaaaagattatacattagtt
gatttaccagcaaatctttcaccaaaagtgataaatcatctaaaaaaagtttgggttgct
gggaagaagttaaatcttactgctcagtaa
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