Francisella tularensis subsp. novicida F6168: AS84_1340
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Entry
AS84_1340 CDS
T03873
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ftd
Francisella tularensis subsp. novicida F6168
Pathway
ftd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ftd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AS84_1340 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ftd03400
]
AS84_1340 (uvrB)
DNA repair and recombination proteins [BR:
ftd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AS84_1340 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AS84_1340 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
Kinesin
Microtub_bd
SWI2_SNF2
AAA_22
eIF3_p135
DUF87
PMT2_N
Motif
Other DBs
NCBI-ProteinID:
AJI46223
LinkDB
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Position
1385813..1387819
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AA seq
668 aa
AA seq
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MNKFNLVTKYAPAGDQPQAIQSLVDGINTGLQHQVLLGVTGSGKTYTMANVIQQTQKPCL
ILAHNKTLAAQLYSEFKQYFPDNAVEYFVSYYDYYQPEAYVAASDTYIEKDSSVNEHIEQ
MRLSATKAILERNDVIIVATVSAIYGLGDPEQYMQMLLHLKVGEELGLKKAQTKLVEMQY
SRNDMDFSRGSFRVRGEVLDIFPADSEKDAIRVEFFDDEIEAISVIDSLTSKKLKSLHRA
TIFPSTHYVASKERKEIVIEEIKKELKERVKYFEKEGKLLEAQRIEQRTKYDIEMIQELG
YCTGIENYSRLLSGRAPGDPPPTLIDYLPENALVIVDESHATLPQFGGMYKGDLSRKSNL
VNYGFRLPSALDNRPLKFNEFESLLPQTIYVSATPANYELEKSQNTVQQVIRPTGLLDPE
VFVRPVAIQVEDALSEINKAIAKEERVLITTLTKKMAENLTEYLSEHGVNVRYLHSDIDT
VERVQIIHDLRHGVFDVLVGINLLREGLDMPEVGVLLIFDADKEGFLRSEKSLIQTIGRV
ARNQNGRAILYADVVTKSMQKAMDETLRRRKLQDEYNQKHNIVPKTIIKNIDDMLDSSPE
IQKRAYKNNLRLKVDDVDVSAILGMTEATKVIKALEKRMRAYAKELEFEKATTIRDKITE
IKQKFINL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaataaattcaacctagtaacaaaatatgcaccagctggcgatcagcctcaagcaata
caaagtcttgttgatggtataaatactggtttacaacatcaagtattgcttggtgtgaca
ggctctggtaaaacatatactatggcaaatgtcattcaacagactcaaaaaccatgcttg
atattagcgcataataaaactctagctgcacaactgtattctgagtttaaacaatacttt
ccggataatgcagttgagtattttgtgtcatattatgattattatcaaccagaagcgtat
gttgccgcatcagatacctatatagaaaaagattcatctgtaaatgagcatattgaacaa
atgcgtttgtcagcaaccaaggcaatacttgaacgaaatgatgtaataattgttgcaact
gtatcagctatatatggtctaggtgatcctgagcagtatatgcaaatgcttttgcaccta
aaggtaggcgaagagttaggactaaaaaaggcgcaaactaagctagtagagatgcaatat
tcacgtaatgatatggattttagtcgtggaagctttcgcgtgcgtggagaggttttagat
attttccctgcagactctgagaaagatgctattcgagtagaattttttgatgatgaaata
gaagcaataagtgtaattgattcattaacctcaaaaaaactcaaatcattacatcgagca
acaattttccctagtactcattatgtggcatctaaagaacgtaaagagatagttattgag
gaaatcaaaaaagaacttaaagaaagagttaagtattttgaaaaagagggaaaacttctt
gaagctcaaagaatagaacaacgtactaagtatgatattgagatgattcaggaacttggc
tactgtacaggaatcgaaaattactcaaggttactttctggaagagctcctggtgatcca
ccacctactttgattgattatctgccagagaatgccttagtgatagttgacgagtcacac
gcgacattaccgcagtttggaggaatgtataagggtgatttatcacgtaaatcaaacctt
gtaaactatggtttccgtcttccttctgctttagataataggcctttgaaatttaatgag
tttgagagtctgttgcctcagacaatctatgtatcagccactccagctaattatgagcta
gaaaagtctcaaaatactgtacagcaagtgattagaccaacgggtttattagacccggaa
gtttttgtaagaccagtagcgatacaggtagaagatgctttatctgagataaataaagcg
attgctaaagaagaaagagtcttgataacgactttaaccaaaaaaatggcagaaaatctt
acggaatatttatctgagcatggagttaatgtcagatacttacattcagatattgatact
gtcgaaagggtgcagattattcatgatttacgccatggtgtttttgatgtgcttgtcggg
attaaccttcttagggaaggtctagatatgccagaggttggtgttttattaatttttgat
gcggataaagaaggtttcttacgttctgaaaaatctttaattcagacgattggacgtgta
gcaagaaatcaaaatggtcgagctattttatatgctgatgtagtgacaaaatctatgcaa
aaagctatggatgagactttgcgccgtcgtaaactccaagatgaatataatcaaaaacac
aatatagtcccaaaaactattattaagaatattgatgatatgctagacagctctccagag
attcaaaagcgcgcttataaaaataatttgcgcttaaaggttgatgatgttgatgtttcg
gctatactaggtatgactgaagctacgaaggttatcaaagctctcgaaaagcgtatgcga
gcttatgcaaaagagctcgaatttgaaaaagctacaactattagagacaagataactgaa
ataaagcagaagtttattaacttataa
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