Francisella tularensis subsp. novicida F6168: AS84_1621
Help
Entry
AS84_1621 CDS
T03873
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
ftd
Francisella tularensis subsp. novicida F6168
Brite
KEGG Orthology (KO) [BR:
ftd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AS84_1621 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ftd03021
]
AS84_1621 (rpoD)
Transcription machinery [BR:
ftd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AS84_1621 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_ner
Sigma70_r1_1
Sigma70_r1_2
PspA_IM30
Motif
Other DBs
NCBI-ProteinID:
AJI45800
LinkDB
All DBs
Position
1667992..1669725
Genome browser
AA seq
577 aa
AA seq
DB search
MTKEDLLSDLKDLMIDGRERGYLTRADILDALPGDVSEDPKIYEEIEAILIDAGIDVYDR
TPQIEEDDERKVSEANLDDLKGKTSDPIRMYMREMGIVDLLDKKGETDIAIRIEEGTTEV
FSTILSYPIVIKTYIERFRELEEKAIDYMNSQDIENEPVARYIRFNEVMAGFSDEQVTEE
KVAEDDHEEKIDTQRAYEFFTNLEKMFEEYQDKPNKKLYTKIVKEFDNLRLSTSHLQKLV
DYIRLPYARVKEFERKILRLCVERSKTPRQEFIKVYKVGSLEWLEPLTKKYKFTENTIRE
IKNLTKQINQFQILMMMDIEELKQVNLEISRSEAKITQAKKEMIEANLRLVVSEAKKYTN
RGLHFLDIIQEGNIGLMKAVDKFDYRKGFKFSTYATWWIRQAITRSIADQARTIRVPVHM
IETINKVNRIKRQILQEKGREATEEEIIEHTPNMTKEKLKKILNISHTPISMESPIGDDE
DSTVGDFIEDKNNYSPIEAANLENLREAIKELIETGLTEREAKVLMMRFGIGMNTDHTLE
EVGKQFNVTRERIRQIEAKALRKLKHPSRSAFLKTFL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaagatttgctctctgatttaaaagatttgatgattgatggtagggaaaga
ggatatttaactagagccgatattttagatgctctaccaggagatgtttcagaagatcct
aaaatatatgaagaaattgaggctatacttattgacgctggtattgatgtctatgataga
actcctcagatagaagaagatgatgaaagaaaggttagtgaagctaatcttgatgattta
aaaggtaaaacttcagatcctattcgtatgtatatgcgcgaaatgggtattgttgatctt
ttagataaaaaaggcgagacggatatcgctattaggatcgaagaaggtactacagaagtt
tttagtacgattttaagctatccgatagtaattaaaacttatattgagcgtttccgtgag
ctagaagaaaaagctatagattatatgaattcccaagatattgagaatgagcctgtagct
agatatatccgttttaatgaagttatggctggttttagtgatgaacaggtaactgaagaa
aaggttgctgaagatgatcatgaggaaaaaattgatactcaaagggcttatgaattcttt
acaaatttagagaaaatgtttgaggaatatcaagataagcctaacaaaaaactttatact
aaaatagttaaggaattcgataatttaagattgtcaacatcacatttacaaaagttggtt
gattatattagattaccttatgctcgagttaaagaattcgaaagaaaaattttaagactc
tgtgttgaaagatcaaaaacaccacgccaagagtttattaaagtttataaagttggttct
ctagaatggttggagccattaactaaaaagtataaatttactgagaatactattagagaa
ataaaaaatttaactaagcaaattaatcaattccaaattttaatgatgatggatattgaa
gagcttaaacaagtcaatcttgagatttcaaggagtgaagctaaaattactcaagcgaaa
aaagagatgatagaagcaaacttaaggctagttgtttctgaagctaaaaagtataccaat
agaggcttacatttcttagatattatccaagaaggaaatattggcttaatgaaagctgta
gataagtttgattatcgtaaaggctttaagttctcgacatatgctacttggtggatacgt
caagcaattactcgttcgattgcagaccaagctagaactattcgtgtacctgtacatatg
attgagacaatcaataaagtaaatagaattaaacgtcagattctacaagaaaaagggcgt
gaagctacagaagaggagattatcgagcatactcctaatatgactaaagagaagctgaaa
aagattcttaatatttcacatacaccaatttcaatggagagcccaattggtgatgatgaa
gattctacagtgggcgattttattgaggataaaaataactattctccgatagaagcagct
aatttagaaaatttacgcgaagcaataaaggagcttatcgaaactggcttaactgagaga
gaagctaaagttctaatgatgcgttttggtattggtatgaatactgatcatactttagaa
gaagtaggtaagcagtttaatgttactagagagcgtattagacaaattgaggctaaggct
cttagaaagcttaaacatccttctagatcggcatttttgaaaacatttttgtaa
DBGET
integrated database retrieval system
