Francisella tularensis subsp. novicida F6168: AS84_185
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Entry
AS84_185 CDS
T03873
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ftd
Francisella tularensis subsp. novicida F6168
Pathway
ftd03030
DNA replication
ftd03430
Mismatch repair
ftd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ftd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AS84_185 (dnaE)
03430 Mismatch repair
AS84_185 (dnaE)
03440 Homologous recombination
AS84_185 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ftd03032
]
AS84_185 (dnaE)
03400 DNA repair and recombination proteins [BR:
ftd03400
]
AS84_185 (dnaE)
Enzymes [BR:
ftd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AS84_185 (dnaE)
DNA replication proteins [BR:
ftd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AS84_185 (dnaE)
DNA repair and recombination proteins [BR:
ftd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AS84_185 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AJI45142
LinkDB
All DBs
Position
complement(210649..214128)
Genome browser
AA seq
1159 aa
AA seq
DB search
MISHLRVHTGYSVVDSTVRLGDLFARAKDKNIVAVALTDVCNLFAAVKFYKQALASGIKP
IFGVELKVDTEFGICDLVLLAENNQGYQNIVKLVSKAYQEADRFGSIPLIPKSWLSEVKL
ESVICLNGGQQGELGKAILAKDYIKADEIINQNIEIFGTNNYIIEIHKLEYENEGLYNEK
ALEYASKYNLIAVATNLTVFMEADDYDIHEIRACINEKTTILDESRKSKFTKEQYLKSAD
EMYETFSALPVLVDNTLAIAKRCNVTFELGKPCLPTVDIPAGLTEKEYFSKLCYQGLDKR
LEKILENRSADKHEHIIKVYKDRLQREIDIICDMGFPGYFLIVEDFIRWSKENDIPVGPG
RGSGAGSLVAYSLLITDIDPLPYGLLFERFLNPERVSMPDFDIDFCIQGRDRVIKYVEQK
YGKESVAQIITYGTMAAKGVVRDVVRVMGQSFGFGDRIAKLIPETPGTTFKKILHEGEPL
YEEMQADEDVAEIIEKAQKLEGLPRSLGKHAAGIVISPTKISDFAPVYCEDKGGDIVTQF
DKGDVEDVGLVKFDFLGLKNLTIINNTVKSINAKRPADQKRLDIADIPLDDQKTFKLLQA
GNTTGIFQLESQGMRQIVKDLGTSNFEEIIALVALYRPGPMENIPTFIDRKHGRKQITYL
HPLLEGVLKETYGIPVYQEQVMQMAQKLAGYTLGGADLLRRAMGKKKPEEMEKQRKIFKE
GAAKHHNIDTKLADEIFDQMEAFAGYGFNKSHAAAYALIAYQTAWLKAHYPDEYMAALMS
GDMGNTDQLVKFILDCKNMGITVLAPNVNKSVYDCIAVSKGTILLGLGAIKGLGGEAIKS
ILTERDIAGEFCSIFDLCRRVDLRKVNKKALEALCYAGAIKDISKNRATAFNSIEKAIKN
AGYVNEMNAAGQDDLFGFTEQESDTDAELERECIVEEWNLKELLINEKKALGMYFSGHII
DEESHWRNHVSFSDLEKIQQPNMDGNSVRIIASMITPPARRKTKTGRVLYIINIDDEFDR
ADCLISEEVFASVKDSIEVDDIVVVEGKVSRDVQRECNKLSVDKVQPISQYIDENFSKVE
LTLRSQNINPTNLKKVLSNLKENIASTNIQKQNILEITVSLDDVDGKFDYLQKPFSIYKF
VNDVSKLIAEGSTVSLSGV
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgatttctcatcttagagttcataccggatattctgttgttgatagtacagtgcgccta
ggcgatctttttgcaagagcaaaagataaaaatattgttgcagtagctcttactgatgta
tgtaatttatttgctgcagttaagttttataaacaagctttagctagtgggattaagcca
atctttggagttgagctaaaggtcgatactgaatttggcatatgtgatttagtattatta
gcagagaataatcaaggttatcaaaatattgttaaactagtctcaaaagcatatcaagaa
gctgataggtttggttcaattcctcttatacctaaatcttggcttagcgaggtaaaacta
gaaagtgtcatttgcttaaatggtggtcagcaaggagagttaggtaaagctatcttagct
aaagattatatcaaggcagatgagattattaaccaaaatattgagatatttgggactaat
aactatatcattgagattcataagttagagtatgagaatgaaggtttgtataatgaaaaa
gctctagaatacgcaagtaagtacaatctcatagctgtagcaacaaacttaactgtattt
atggaagcagatgattatgatattcatgaaattagagcctgtatcaatgagaagacaaca
atattagatgagtcgcgtaaatctaaatttactaaagaacaatatctaaaatcagctgat
gaaatgtatgaaactttttctgcactgccagtacttgtagataatacactagcaattgct
aagcgttgtaatgtcacatttgagttaggtaagccgtgtttaccgactgtcgatattcca
gctggtttaacagaaaaagagtacttttcaaaactgtgctatcaaggtttagataagcgt
ttagaaaaaattctagaaaataggtcagctgataagcatgaacatatcataaaagtctat
aaagataggctacaacgagaaattgatatcatttgtgatatgggtttcccaggatacttt
ctgattgtcgaagattttatccgctggtcaaaagaaaatgatatccctgttggaccaggt
cgtggttctggtgctggttcattggtggcgtattctttgttaattactgatatagatcca
ttaccttatggattactttttgagaggtttttgaatcctgaaagagtatcaatgcctgat
tttgatatagatttttgtatccaaggtagagatagggttatcaagtatgttgagcaaaaa
tatggcaaagagagtgtcgcacagattattacctatggtacgatggctgctaaaggtgtt
gtgcgtgatgttgtacgggtaatgggccaaagttttggttttggtgataggattgcgaag
ttaatcccagaaacaccagggacaacatttaagaaaattcttcatgaaggcgagccattg
tatgaggaaatgcaagcagatgaggacgttgccgaaattatcgagaaggctcaaaaactt
gaaggtttgccgcgtagcttaggtaagcatgctgcgggaattgtgatatcaccgacaaaa
atttctgattttgcacctgtgtattgtgaggataagggtggagatattgtaacgcaattt
gataaaggtgatgttgaagatgttggtctggttaaatttgactttttaggactaaaaaac
ttaacgatcatcaataatactgttaaaagcattaatgctaaaagaccagctgatcaaaaa
cgtttagatatcgctgatatacctttagatgatcaaaaaacatttaagctgttacaagct
ggtaatactacggggatatttcagcttgaatctcaaggtatgcgtcagattgtcaaagac
cttggtacttctaattttgaggagattattgctctagtagcgttatatcgtccgggaccg
atggagaatatcccaacatttattgatcgtaagcatggtagaaaacagattacttacttg
catccgctacttgagggagtactaaaagaaacttatggtattccagtatatcaagagcag
gttatgcagatggcacaaaaacttgcaggctatactcttggtggagcagacttattacgt
cgtgctatgggtaagaaaaaacctgaagagatggagaaacagcgtaaaatcttcaaagaa
ggtgccgctaaacatcataatattgataccaagcttgctgacgagatatttgaccaaatg
gaggcttttgctggttatggttttaacaaatcacatgctgctgcatatgccttgattgcg
tatcaaacagcttggttaaaagcacattatccagatgaatatatggctgcccttatgtct
ggagatatgggcaatactgatcagcttgttaaatttatcctagattgtaaaaatatgggt
atcacagttctagcacctaatgtaaacaaaagtgtctatgactgtatagctgtctcaaaa
ggaacgatcttgcttggcttaggagctatcaaggggcttggtggtgaggctatcaaaagt
atacttacagagagagatatagctggagaattttgctctatattcgatttatgtcgcagg
gttgatttacgcaaagttaataaaaaagcgcttgaagcactatgttatgcaggcgctatc
aaagatatctctaaaaatagagcaacagcatttaactctatcgaaaaagctatcaaaaat
gctggttatgtcaatgagatgaatgctgctgggcaggatgatttatttggttttacagag
caagagagtgatactgatgcagaactagagagagaatgtatagtagaagagtggaatctc
aaagagttgcttattaatgagaaaaaagctttaggaatgtatttctcaggacatattatt
gacgaggagagccactggcgcaatcatgttagctttagtgaccttgaaaaaattcaacaa
cctaatatggatggtaattccgtaagaattatcgcaagtatgataactccaccagcaaga
cgtaaaactaagactggtcgagttttgtatattatcaatattgatgatgagtttgataga
gctgattgtttgattagtgaagaggtttttgctagtgttaaagatagtatcgaagttgat
gatattgttgttgtagagggcaaagttagtcgtgatgtgcaacgagaatgtaataagcta
agtgtagataaagttcaaccaatatcacaatatattgatgaaaattttagtaaagttgaa
ctaacattaagaagtcaaaatataaatcctactaatctcaaaaaagttctcagtaatctc
aaagaaaatatagcctcaaccaatatccaaaaacaaaatattttagaaataacggtttct
cttgatgatgttgatggtaagtttgattacttacaaaagccattttctatctacaaattt
gtcaatgatgttagcaagctaatagctgagggtagcacagttagtttgagtggggtttaa
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