Francisella tularensis subsp. novicida F6168: AS84_332
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Entry
AS84_332 CDS
T03873
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ftd
Francisella tularensis subsp. novicida F6168
Brite
KEGG Orthology (KO) [BR:
ftd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ftd03009
]
AS84_332 (rimO)
Enzymes [BR:
ftd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AS84_332 (rimO)
Ribosome biogenesis [BR:
ftd03009
]
Prokaryotic type
ribosomal protein modification factors
AS84_332 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CDKN3
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
AJI44756
LinkDB
All DBs
Position
complement(351514..352833)
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AA seq
439 aa
AA seq
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MIKIPKIGFVSLGCPKNLVDSERIITKLKAEGYDLVDSYDNADMVIVNTCGFLNSAIDES
LEVIGEAIAENGKVLVTGCLGNKADLIKEKHPEVLSITGPQDYENLIEAVHTHAPIFAND
FVSLVPPQGIKLTPRHYSYLKISEGCNNTCTFCIIPDIRGKLKSRSIDNIMKEAEKLKNA
GVKELLVISQDTSAYGVDIKYKSGIWNNKEYQSNIIDLATALGDLDMWTRLHYVYPYPHV
DKIVPLMAQGKILPYLDVPLQHSSPEVLKRMKRPAHTQKTLDRINKWRDICPDITIRSTF
IVGFPGETEADFEHLLDFAEKAQLDRVGCFKYSEVEGAKANQFDNLISEEVKQQRLDEFM
GLQAQISADKLQRFVGTEQQVIIDVINKDENYAIGRTKYDAPEVDGQVIIGDALERNLKV
GEFATVEITESTEYDLIAD
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaatccctaaaattggttttgtcagcttgggttgtccgaaaaaccttgttgat
tctgagcgtatcataactaagctaaaagctgagggttatgacctggttgatagctatgat
aacgctgatatggttattgttaatacttgtggatttctaaactctgctattgatgagtct
ctagaggttattggcgaagctatcgcggaaaatggtaaggtgctagttactggatgtctt
gggaataaagctgatcttattaaagaaaaacatccagaggttttaagtattacaggacct
caagattatgaaaatctaattgaagctgtgcatacccatgcgccaatttttgctaatgat
tttgtatctttagtaccgccacaaggtattaagcttacaccgagacattattcatatctg
aaaatatcagaagggtgtaacaatacttgtactttttgtattattccggatatacgtggc
aaattaaaaagtcgttctatagacaatatcatgaaagaagctgaaaagcttaaaaatgca
ggcgttaaagagctattggtaatatctcaagatacttctgcgtatggcgttgatattaag
tacaaatcaggtatttggaataataaagaatatcaaagcaacattattgatcttgctact
gctcttggcgatttagatatgtggacgagactacactacgtttacccttatcctcatgtt
gataaaattgtaccacttatggctcaaggaaagatacttccttacctagacgtaccttta
caacattcatctccagaagttctaaagagaatgaaacgcccagctcatacacaaaaaact
cttgatagaatcaataagtggcgtgatatatgtccggatataactattcgtagtacattt
atagtaggtttccctggtgagacagaggctgattttgagcatttgctagactttgctgaa
aaagctcagcttgatagagtcggttgctttaaatattctgaagtagagggtgcaaaggct
aaccagtttgataatctaatttctgaagaggtcaaacaacagcgtttagatgaatttatg
gggttacaagcacaaataagtgccgataaattacaacgatttgttggaacagaacagcaa
gtaatcatagatgtcataaataaagacgaaaactatgcgattggtcgtactaaatatgat
gctccagaagtagatggtcaagtaattatcggcgatgcgctagaaagaaatctaaaagtt
ggtgaatttgcaaccgtcgagattacagagtcgactgaatatgatctgatagctgattag
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