Fluviicola taffensis: Fluta_2161
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Entry
Fluta_2161 CDS
T01455
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
fte
Fluviicola taffensis
Pathway
fte03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fte00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Fluta_2161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fte03021
]
Fluta_2161
03400 DNA repair and recombination proteins [BR:
fte03400
]
Fluta_2161
Enzymes [BR:
fte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Fluta_2161
Transcription machinery [BR:
fte03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Fluta_2161
DNA repair and recombination proteins [BR:
fte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Fluta_2161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AEA44147
UniProt:
F2I9Y9
LinkDB
All DBs
Position
2488151..2492431
Genome browser
AA seq
1426 aa
AA seq
DB search
MAYRKETPKKQSSFNKITISLASPEVIRDQSSGEVLKPETINYRTYKPERDGLFCERIFG
PVKDYECHCGKYKRIRYKGIVCDRCGVEVTEKKVRRERMGHISLVVPVAHIWYFRSLPNK
IGYLLGLPTKKLDQIIYYERYVVIQVGIANNLDGSALTEKEFLTEEEYLDILDTLPRENQ
YLEDTDPNKFIAKMGAEALYDLLRKLNLEDLSYKLRHQANTETSVQRKHEALKRLQVVEA
MRESQTRIDNRPEWMIVKVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRL
IEIKAPEVILRNEKRMLQEAVDSLFDNSRKASAVKTESNRPLKSLSDSLKGKQGRFRQNL
LGKRVDYSARSVIVVGPDLKLHECGLPKDMAAELYKPFIIRKMIERGIVKTVKSAKKIVD
RKEPVVWDILESVLKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIRLHPLVTTAFNADFD
GDQMAVHLPLGNAAILEAQLLMLASHNILNPANGAPIAVPSQDMVLGLYYITKMRTSTPE
HKVKGEGSIFYSPEEVIIANNEGKLDMHAPIKVKSYDLNADGVPALMMIDTTCGRVLFNE
VVPREVGFINDVLTKKALRDIIGHVLKICGTAKTAKFLDDIKELGYGMAFRGGLSFNLDH
IIIPKEKEILVAKAETEVKEVMANYNMGLITNNERYNQIIDIWTHTNSRLTNTLMEQLKN
DDQGFNSIYMMFDSGARGSKEQIRQLSGMRGLMAKPQKSGASAQEIIENPILSNFKEGLS
ILEYFISTHGARKGLADTALKTADAGYLTRRLVDVAQDVVINVMDCGTLRGLVATSLKKN
DEIVEPLIDRILGRTSVHDIFHPETEQLIVEAGELITDTVADEIEKAGIEEVEIRSVLTC
EMRRGVCSKCYGRNLATHRPAQDGDAVGVVAAQSIGEPGTQLTLRTFHVGGTASNIADVS
DLKAKSSGKLEIDELRTISRKGSDGTEKIIVVGRSGELKISDPKTGVVLMTSNIPYGSEM
MIENNISVKKGDVICKWDPYNAVIISEVSGKVVFENIIDGVTYREEVDEQTGFTEKVIIE
SRDKKKNPAIHIIDPKTKEVLREYNIPVDSHISVNEGDKAELGVILVKIPRVAGKTGDIT
GGLPRVTELFEARNPSNPAVVSEIDGIVEFGKIKRGNREIQVTSKNGDVRKYLVPLSKHI
LVQENDFVRAGQSLSDGATTPNDILNIQGPTKVQEYIVNEIQEVYRLQGVKINDKHFEVI
VRQMMLKVEIIDAGDTRFLEGQSIHKADFMEENDSIYGMKVVVDAGESSTLKAGQIVSAR
KLRDENSQLKRADKQLVESRDAVPATSTPLLQGITRASLQTQSFISAASFQETTKVLNEA
AISGKEDHLLGLKENVIVGHLIPAGTGVRRFQKVIVANKEELDAIS
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atggcttacagaaaagaaacaccgaaaaaacaaagtagtttcaataagattacgatctcg
ttggcttctcctgaggtgatccgtgatcaatcaagcggagaagtgctcaagcctgagaca
attaactatcgtacatacaaaccggaaagagatggattgttctgtgaacgcatcttcgga
ccagtaaaagattacgaatgtcattgtggtaagtacaaacgtatccgatacaaagggatt
gtttgtgaccgttgtggtgttgaagtaactgagaaaaaagtacgtcgtgagcgtatggga
catatctctttggttgttcctgttgcacacatctggtatttccgttcattaccaaataaa
attggttatttattgggattgccaaccaaaaaattggatcaaatcatttattacgagcgc
tacgtagttattcaagttggtatcgctaataatttagatggtagtgcacttactgaaaag
gagttcttgacagaagaagagtacttagatatcttggatactttgccaagagaaaaccaa
tatttggaagatacagatccaaacaaattcatcgcgaagatgggtgcggaggctttgtat
gacttgttacgtaaattgaatttggaagatttatcttacaaattgcgtcaccaagcaaac
acagaaacttctgttcaacgtaaacacgaagctctaaaaagacttcaagttgtggaggca
atgcgtgaatctcaaacgcgtattgacaatcgtcctgagtggatgattgtgaaagtagtt
ccggttattccaccagaattacgccctctagttccgttggatggtggacgtttcgcaaca
tcggatttgaacgacctttaccgtcgtgtgattatccgtaataaccgtttgaagcgtttg
atcgagatcaaagctccagaggtaattttgcgtaatgagaagcgtatgttacaagaagct
gttgactcattgttcgacaactctcgtaaagcttctgctgttaaaacagaatcaaatcgt
ccattgaaatccctttctgattcattgaaaggtaaacaaggacgtttccgtcaaaactta
ttgggtaaacgtgttgactactctgcgcgttcagtaattgttgttggtccagatttgaaa
ttacacgagtgtggtttaccaaaagacatggctgcagagctttacaaaccgtttattatt
cgtaagatgattgaacgtggtattgtgaaaacggttaaatctgcaaagaaaatcgttgac
cgcaaagagccagttgtttgggatatcttagaaagtgtattgaaaggacatccagtttta
ttaaaccgtgctcctacgcttcaccgtttaggtattcaagcatttcaaccaaaattaatc
gaaggaaaagcgattcgtttgcacccgttggtaacaacagcattcaacgccgatttcgat
ggtgaccagatggcagttcacttacctttaggtaacgctgcaattttggaagctcaattg
ttgatgcttgcttctcacaacattttgaaccctgcgaatggagcaccaattgcggtacct
tctcaggatatggttttgggtctttactacatcacgaagatgcgtacaagtaccccagaa
cataaggtaaaaggtgaaggaagtattttctattctccagaagaagttatcattgcgaat
aacgaagggaaattggatatgcatgcgccaatcaaagtgaaatcttacgatttaaacgca
gatggtgtaccagctttaatgatgattgatacgacttgtggtcgggtattattcaacgaa
gttgttccaagagaggttggattcattaatgatgtcttaactaagaaagcgcttcgagat
attatcggacatgtattgaaaatatgtggaacagctaaaacagctaagttcctagatgat
atcaaagaattaggatacggtatggcattcagaggtggattatcattcaacttggatcac
atcattatcccgaaagaaaaagaaattttggttgcgaaagcagaaactgaagtgaaagag
gtaatggccaattataacatgggtcttatcacaaataacgaacgttacaaccaaattatt
gatatttggacacatacaaactctcgattgacaaacacgttgatggagcaattgaagaat
gatgatcaaggattcaactctatctatatgatgtttgactctggagctcgtggttcgaaa
gaacaaattcgtcagttgtctggtatgcgtggtttgatggcaaaacctcaaaaatctgga
gcttctgcgcaagaaattatcgagaatccgattctttctaactttaaagaaggtctttcg
attttggagtactttatttctactcacggtgcacgtaaaggtttggccgatacagcattg
aaaacggcggatgcgggttacttaactcgtcgtttggttgacgtagcacaagacgttgtt
attaacgtaatggattgtggtactttaagaggtttggttgcaacatcattgaagaaaaat
gatgagatcgttgagccattgatcgaccgtattttaggaagaacatctgtacacgatatt
ttccacccagaaactgagcaattaattgttgaggcgggtgagttgattactgatacagtt
gccgatgaaatcgaaaaagcaggtattgaagaagttgagatccgttcggtattgacttgt
gaaatgcgtcgtggagtttgttctaaatgttacggacgtaacttggcaactcaccgccct
gcacaagatggtgatgctgttggtgtagttgctgctcaatcaattggtgagccaggaaca
cagttaacattgcgtacattccacgttgggggtactgcatctaacatcgctgatgtatcc
gatttgaaagcaaaatcttctgggaaattagaaatcgatgagttaagaacaatttctcgt
aaaggttctgatggaactgaaaagattattgttgttggtcgttcaggtgaattgaaaata
tctgatccaaaaactggagttgtattaatgacttcaaacattccttacggatctgaaatg
atgattgagaataacatttcagtgaaaaaaggagacgttatctgtaagtgggatccgtac
aatgcggtaatcatttcagaggtttctggaaaagtagtatttgaaaatataattgacggt
gttacttaccgcgaggaagtcgatgagcaaacaggatttactgaaaaagtaatcattgaa
tctcgcgataaaaagaaaaaccctgcgattcacattattgatcctaaaacgaaagaagta
ttacgcgagtataacattccagttgactcacatatttctgtaaacgaaggtgataaagct
gaattaggagttatcttggttaaaattccacgtgtagctggtaaaacaggggatatcact
ggaggtcttccacgtgtaacggaattattcgaagcgcgtaacccttcaaatcctgcagtt
gtttctgaaattgatggtattgttgagtttggtaaaattaaacgtggtaaccgtgaaatt
caagtgacttctaaaaatggagatgttcgtaaatacttggttccactatctaaacatatc
ttggtacaagaaaatgatttcgttcgtgctggtcaatctttatcagatggagcaacaaca
ccgaatgatatcttgaatatccaaggtccaacgaaagtacaagagtacatcgtaaatgaa
atccaagaggtttaccgtttacaaggggtaaaaattaacgataaacatttcgaagtaatc
gttcgtcagatgatgttgaaagtagaaatcattgatgctggggatactcgtttcttagag
ggacagtcgattcacaaagctgatttcatggaagaaaatgattctatctatggaatgaag
gtcgttgttgacgctggagaatcttctacgttgaaagctggtcaaattgtttctgctcgt
aaattgcgtgatgaaaactcacaattgaaacgtgctgacaagcaattggtagaatctcgt
gatgcagttcctgcaacttcaacaccattgttacaaggtattacacgtgcttcattgcag
acacaatcatttatttctgctgcttccttccaggaaacaacaaaagtattgaacgaggct
gcaatctctggaaaagaagatcatttattaggtttgaaagaaaacgtaattgttggtcac
ttaattccagctggtactggtgtacgtcgtttccaaaaagtcattgttgcaaacaaagaa
gaattggacgcgatttcttaa
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