Fluviicola taffensis: Fluta_2173
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Entry
Fluta_2173 CDS
T01455
Name
(GenBank) 2,3 cyclic-nucleotide 2-phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
fte
Fluviicola taffensis
Pathway
fte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Fluta_2173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fte03019
]
Fluta_2173
Messenger RNA biogenesis [BR:
fte03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Fluta_2173
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
Vit_open_b-sht
DUF4843
Motif
Other DBs
NCBI-ProteinID:
AEA44159
UniProt:
F2IA01
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Position
2502111..2503646
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AA seq
511 aa
AA seq
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MVNVIIGALVGLIGGGIITFIIQNTMLKNRRAQILKEADLEGEAMKKDKILQAKERFLKL
KEEHEENVKERERRMQSNEDRVKGKEKSLTQKIEEVSRKEKDTDRLQGELATKVEANEVR
YQELEKMHQKRVAELTKITGMSIEDAKNLLMESLKDEARTSAMVHIKEITEEAKLNANRE
AKRIVIQTIQRVASEQAVENAVSVFNIESDEVKGRIIGREGRNIRALEAATGVEIIVDDT
PEAIILSCFDPVRREIARLALHQLVSDGRIHPARIEEVVVKTKKSLEEEIAETGRRTCID
LGIHGLHPELIRMVGRMKYRSSYGQNLLQHSREVANLCAIMAAELGLNVKVAKRAGLLHD
IGKVPDEEPELPHAILGMKIAEKFGEKPDVLNAIGAHHDEIEMTSLISPIVQICDSISGA
RPGARREVVESYIKRIKDLENLALSYDGVNSAYAIQAGRELRVLVESEKVTDLRADELSF
AISQKIQTEMTYPGQVKVTVIREKRSVNYAK
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatgtaattattggagcattggttggattaataggaggtggtattatcacgttc
attatccaaaatacaatgctcaaaaacagaagagcacaaatcttgaaagaagcggatcta
gaaggggaagcgatgaaaaaagataagattctccaagcaaaagaacgctttttgaaatta
aaggaagagcatgaagaaaacgtgaaagaacgcgaaagacgcatgcaatctaatgaggat
cgtgtaaaaggaaaagaaaaatcgttgacgcaaaaaattgaagaggtttctcgaaaagaa
aaagatacagatcgtctgcaaggtgagttggctacgaaagttgaagcgaatgaagtgcgc
tatcaggaattggaaaaaatgcatcaaaaacgtgttgcagaattgaccaaaattactgga
atgtccattgaggatgcaaagaatttgttgatggagtctttgaaagacgaagcgagaact
tctgcaatggttcacatcaaggaaattacggaagaagcaaaattgaatgcaaacagagaa
gcaaaacgcattgttattcagacaattcaacgtgtggcttccgagcaagctgttgaaaat
gcagtttctgtatttaatattgaatcggatgaagtaaaaggtagaatcattggtcgtgaa
ggtcgaaatatccgtgcgctagaagctgcaacaggtgttgagattattgttgacgatact
ccagaagcaattattttgtcttgtttcgaccctgtaagaagagagattgctcgtttggct
ttgcaccaattggtttctgatggacgtattcaccctgctcggattgaagaggttgttgtg
aaaacaaaaaaatctttggaagaagaaattgctgaaacgggacgaagaacatgtatcgat
ttgggaattcacggattgcatcctgagttaatccgaatggttggacgtatgaaataccgt
tcttcttatggacaaaatttattgcaacatagtcgcgaggtagcaaacctttgtgcgatt
atggcggctgagttaggattgaatgtgaaagttgctaaaagagcaggtttacttcacgat
attggtaaagttccagatgaagagcctgaattaccacatgctattctagggatgaaaatt
gctgagaaatttggtgagaaaccagatgtattgaatgcaattggggctcaccacgatgag
atcgaaatgacttcgttgatttcaccaatcgttcaaatttgtgactccatttctggtgct
cgccctggagcacgtcgtgaggtggtagaatcatatatcaaacgaatcaaagacttagag
aatttggcattgtcttatgatggtgtaaattcagcatacgctattcaagcaggtagagaa
ctacgtgtattggtggaaagtgaaaaagtaacggatttgcgtgcagatgaattgtcgttt
gcaatctctcaaaaaatccaaacagagatgacttatccaggtcaggtaaaagtgactgtg
attcgtgaaaaacgttctgtcaattacgccaagtag
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