Fluviicola taffensis: Fluta_2515
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Entry
Fluta_2515 CDS
T01455
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
fte
Fluviicola taffensis
Pathway
fte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Fluta_2515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fte03019
]
Fluta_2515
Enzymes [BR:
fte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Fluta_2515
Messenger RNA biogenesis [BR:
fte03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Fluta_2515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
AAA_19
Flavi_DEAD
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
AEA44500
UniProt:
F2IDV8
LinkDB
All DBs
Position
complement(2901867..2903090)
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AA seq
407 aa
AA seq
DB search
MRFSDYPISDEIKKQLEVLGFKRPTDIQFKAISPILNGEDVFGIAQTGTGKTAAFAIPII
HKLSTSRPKSKSPRCIVLAPTRELAEQIKDAFESIGVGSNIRITAILGGLEQDKQIQELK
RGTDVIVATPGRVFDLRSQGHLSLDSIQFLVLDEADRMLDLGFAHDMKAIHKLSPQRNRQ
TMFFSATIDKKIKALAYDLVRDAIRIQISPDDPVSKNVEHGAITVEMDDKRFFLENIIKE
YEEFKYVVFVRTKVRCERVVAAMERVGIHSEALHGGIEQKDRFAVLERFKSGENKILITT
DVAARGIDIQGVDYVINYDLPDQPEQYVHRIGRTGRGENKGQALSFCSSEEEKMLEEIEL
YLGYDIEKIEISKGDYSAILRDTEDLSYNWKKLLDEANEEDGTSDSW
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcgattttcagattatcccatttccgacgagatcaaaaaacaattagaagtcttgggt
tttaaacgacctacagatatccaatttaaagccatatctccaattctcaatggagaagac
gtttttggaattgcacaaactggaacaggaaaaacagctgcttttgccattccaattatt
cataaactgagtacttcgagaccaaaatcaaaaagtccgagatgcattgttttggctcca
acacgagaactcgctgaacaaattaaagacgcatttgaaagtattggagttggctccaat
attcgaatcactgctattttaggaggattggagcaagacaaacagattcaagaactgaaa
agaggaacggatgtaatcgttgcgacaccaggccgtgtattcgatttgcgttcgcaaggc
cacctttctttggattccattcaatttttggtgttagacgaagccgatcgcatgttggat
ttaggatttgcacacgacatgaaagcaattcacaagctatctcctcagcgaaaccgccaa
acaatgttcttttcggcaaccattgacaagaaaatcaaagcattggcttatgacttagta
cgggatgcgattcgtattcaaatttcacccgacgaccccgtttccaaaaatgtagaacac
ggagctattactgttgaaatggacgataagcgcttctttttagaaaacatcatcaaggaa
tacgaagagtttaaatacgttgtttttgtacgaacaaaagtgcgctgtgaacgtgttgtt
gcagcaatggaacgcgttggaattcactcagaagcattgcatggtggaatcgagcaaaaa
gaccgcttcgcagtattagaacgatttaaatcaggcgaaaacaaaatcctcatcacaaca
gatgttgccgcaagaggaatcgatattcaaggagtagattacgtcattaattatgattta
cccgatcagccagagcaatacgtgcatcgaattggacgaactggtcgtggagaaaataaa
ggtcaagcactttcattctgtagttcggaagaagaaaaaatgttggaagaaattgagcta
tacttaggctacgatatcgagaaaattgaaattagcaaaggagattattcagccattcta
agagacaccgaggatctatcctataactggaaaaaactcctggatgaagccaatgaggaa
gacggaactagcgatagttggtag
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