Fluviicola taffensis: Fluta_3405
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Entry
Fluta_3405 CDS
T01455
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
fte
Fluviicola taffensis
Pathway
fte02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fte00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Fluta_3405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fte03021
]
Fluta_3405
Transcription machinery [BR:
fte03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Fluta_3405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
RPA_C
HTH_28
Sigma70_r4_2
GerE
HGD-D
Motif
Other DBs
NCBI-ProteinID:
AEA45377
UniProt:
F2IBQ1
LinkDB
All DBs
Position
complement(3910813..3911679)
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AA seq
288 aa
AA seq
DB search
MRQLKITKSITNRESQSLDKYLQDIGKEELITAEEEVELARKIKQGDQRALEKLTRANLR
FVVSVAKQYQNQGLTLPDLINEGNLGLIKAAQKFDETRGFKFISYAVWWIRQSILQALAE
QARIVRLPLNQVGSLNKINKAFSRLEQEFERPPSAEELAEALEVPEDKIKESLNVSGRHV
SMDAPLSSSEDGGTLMDVMANADSPKADHALMAESLQKEIERSLSTLTDKEREIIRLFFG
IGMNHGLTLEEIGAKFNLTRERVRQIKEKAIRRLRHTSRNKLLKAYLG
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagacaacttaagattacaaaatcgattaccaatcgtgagagccagtcattagacaag
tatcttcaagacattggtaaagaagagctaatcaccgccgaagaagaagtagaattggcg
cgtaaaatcaaacaaggcgatcaaagagcattagagaagttaactcgtgccaacttacgt
ttcgtcgtgtctgtagcaaaacagtatcaaaatcaaggattaacattgcccgatcttatt
aacgaagggaatttaggtttgatcaaagctgcacagaaatttgatgagacgcgtggtttc
aaattcatttcttacgctgtatggtggattcgtcaatctatcttacaagctttagcagaa
caagctcgtattgtacgtttaccattaaaccaagttggttcattaaacaaaatcaacaag
gcattttcaagattggaacaagaattcgaaagacctccttcagcagaagaattagcagag
gctttggaagttccagaggataaaatcaaagaaagcttaaatgtttcaggtcgtcacgta
tctatggatgctcctctttcttcatctgaagacggtggtacattgatggatgttatggca
aacgctgattcaccaaaagctgaccatgcgctaatggcagagtcacttcaaaaagaaatc
gaacgttctttaagtacattaacggacaaagagcgtgaaatcattcgtttattcttcgga
attggaatgaatcacggtttgactctagaagagattggtgctaagtttaatttaacacgc
gagcgtgttcgacaaattaaggagaaggcgattagacgtcttcgacacacctctcgaaat
aagttattgaaagcatatttaggataa
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