Francisella tularensis subsp. tularensis TIGB03: FTU_0239
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Entry
FTU_0239 CDS
T01762
Name
(GenBank) RNase R-related protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ftg
Francisella tularensis subsp. tularensis TIGB03
Brite
KEGG Orthology (KO) [BR:
ftg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ftg03016
]
FTU_0239
Enzymes [BR:
ftg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
FTU_0239
Transfer RNA biogenesis [BR:
ftg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FTU_0239
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
Motif
Other DBs
NCBI-ProteinID:
AFB78362
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Position
273209..275065
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AA seq
618 aa
AA seq
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MQKNSLVIFKSKPAKVINLLDKKIEIETLDGKNIKLPAKSVQLLVESEKDFELESLKELE
IAELEMTWELLQEQQQTSVEELCELLFESIGVNQAYTVWLLVSEGEYFSFNDDFSINIHS
QEQKNAIVRDKQEKLKKEQELNDFIERLNNKTFNEDDRKFLKEIEALATLKTNKCRFFKY
LNMEESENSAYKLLLDIGYCDEFFNPYLYRYGAELEHNSAEFNYNSKSDNQRVDLTHLKA
YAIDDEGSNDPDDAISWDSKKNKMWVHIADPSSSISFGDEVDLQARARGSNLYVPEQIVM
MLPPQATAKLGLGLQEVSPAVSVGFRIDEQGDIHDIEICFSNIKVTRYSYEFVEENMHTL
ELGDIVSYAKYFTDKRLSKGAVELDFPEIKISLDANKNVKLTDLPRLNSRTLVRDTMLMA
GVAVGQFCIKNNISVSFSTQPEHDLGQDGLENIDSIADMFATRKKLQRGRYSTQPSMHAG
MGLEAYVQVTSPLRRYLDLIVHYQLRNFLQHKEMISAQEIDNIIAQVDIPIKSNRQTERF
SNSHWKLVYLIQNPDLEFQATVIEKLEKSRLMVSIAALAMTKKLSVSGKYDLNDQIKLQN
TSVNLVTQEAFFRVIEEN
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaattctctagtaatatttaaatctaaaccagcaaaggttattaatctctta
gataaaaaaattgagattgagactctcgatggtaaaaatattaagttacccgcaaagagt
gttcaattacttgtagagtcagaaaaggattttgaacttgaaagtttaaaagagctagaa
atagctgaacttgaaatgacttgggaattattacaagagcaacaacaaacatctgttgaa
gagctatgtgagttactttttgaatctataggggtaaatcaggcttataccgtgtggctt
ttagtttcagaaggagagtattttagctttaatgatgattttagtatcaatattcattca
caagagcaaaaaaatgcaatagttagagacaaacaagagaaacttaaaaaagagcaagaa
cttaatgatttcatagagcgtttaaacaataagacttttaatgaagatgataggaaattt
cttaaggaaatagaagctctagcaacacttaaaactaataagtgtcgtttttttaagtac
ttaaacatggaggagtctgagaatagtgcgtataaattgcttttggatattggctattgt
gatgagttttttaacccttatttatacaggtatggtgctgagttagaacataattctgca
gagtttaactacaattctaaatcagataaccagcgagtagatctgacacatttaaaggct
tatgctatagatgatgaaggtagtaatgatcctgatgatgcaattagttgggatagcaaa
aaaaataaaatgtgggtacatatcgcagatccttcttctagtattagttttggtgatgag
gttgatcttcaagctagagcacgaggctcaaatttatatgtgccggaacagatagtcatg
atgttacctcctcaagcaacagcaaaattaggcttaggcttacaggaggtatctcctgca
gtatctgtaggatttaggattgatgagcaaggtgatatccatgatattgaaatatgcttt
agtaatataaaagttacacgatattcttatgaatttgttgaagaaaatatgcatacttta
gagcttggcgatatagtaagttatgcaaaatatttcactgataagcgtttatctaaaggt
gcagttgagcttgatttcccagagataaagatatcattagatgctaataaaaatgttaaa
ttaactgatttaccacgtttaaactcaaggacacttgtacgagatacaatgctaatggct
ggtgttgcagtaggacagttttgtattaaaaataatattagtgtatccttttctacacag
cctgaacatgatcttggacaagatggtttagagaatatcgattcaatagctgatatgttt
gcaacacgcaaaaaactccaaagaggcagatattctacacaacctagtatgcatgcaggg
atgggattagaagcctatgtacaagtaactagtccattgagaagataccttgatttgatt
gtacactatcagttacgtaattttctgcagcataaagagatgataagtgctcaagagatt
gataacataattgctcaagttgatattcctataaaatcaaatagacaaactgagcgtttc
tcaaattcacactggaagttggtttacctaatccaaaatcctgacctggaatttcaagcg
acagttattgagaaattagaaaaaagtagattaatggtttctattgcagctttagcgatg
actaaaaaactttctgtcagcggtaagtatgatttaaatgatcaaataaagttacaaaac
acctcagtaaaccttgttacacaagaggctttctttagagttattgaagaaaattaa
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