Francisella tularensis subsp. holarctica OSU18: FTH_1427
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Entry
FTH_1427 CDS
T00399
Symbol
uvrA
Name
(GenBank) UvrABC excinuclease subunit A
KO
K03701
excinuclease ABC subunit A
Organism
fth
Francisella tularensis subsp. holarctica OSU18
Pathway
fth03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FTH_1427 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fth03400
]
FTH_1427 (uvrA)
DNA repair and recombination proteins [BR:
fth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FTH_1427 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FTH_1427 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
nSTAND1
AAA_22
AAA_23
AAA_21
AAA_33
nSTAND_NTPase5
DnaJ_CXXCXGXG
Viral_helicase1
cobW
NACHT
Glu_synthase
Motif
Other DBs
NCBI-ProteinID:
ABI83239
LinkDB
All DBs
Position
complement(1396443..1399265)
Genome browser
AA seq
940 aa
AA seq
DB search
MKKIIVKGAKTHNLKNIDVEIPRDKLTVITGLSGSGKSSLAFDTLYAEGQRRYVESLSSY
ARQFLSMMDKPDVEHIEGLSPAISIDQKTTSHNPRSTVGTVTEIYDYLRVFFARAGTPKC
PIHQIELKAQTISQMVDKILEFDEDSRLMILAPIISQKKGTHHTLLDKILAQGYVRVRIN
DEFYNLDEDYPELDRYKKHNIDVVIDRFKPKKENEQRIAESIETALDLGNGIVKLADMAN
QTGDDILFSSKHACPLCDFALKELSPRIFSFNSPLGACSSCDGLGVKEFFDEQKVVIDPS
ISLKHGAIVKWNKTNQYYFSQLESLATHYKFSLDERFEKLPKRIQEIILYGSGDEAIVMS
VDSIRGGRQTRIKPFEGVIPHFERRYYESDSDMVKKDLYELMSNLECKSCNGARINEYAR
NIFIADKNIADVCALPIDELLKWLDSLKFVGQQQVIAENLLKEIKLRVEFLANVGLEYLS
LARQADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNQRLLDALHNLKNLGN
TVIVVEHDEDAIRQADYIIDMGPMAGVHGGEVVAAGGYETILKSKKSLTADYLSGRRKIE
VPKTRLKASKNRYLEISGAVGNNLQGDNLKIPLGALTCVTGVSGSGKSTLINRTLYPLAS
RLLNRSILVPMQYTSHKGFNHLDKVIDIDQSPIGRTPRSNPATYTGVFTPIRELFAATSE
ARARGYIAGRFSFNVRGGRCEACQGDGVIKVEMHFLADVYVACDVCQGKRYNRETLAVQY
KGKNIYEVLEMTVEEALEFYDAVPSIKTKLEALMNVGLSYIKLGQSATTLSGGEAQRVKL
AKELSKRSTSKTLYILDEPTTGLHFYDIHQLLKVIMDLRDKGNTVVIIEHNLDVIKMADW
LVDLGPEGGSKGGQIIFEGTPEDIINCKKSYTGKYLKDLL
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaattatcgtcaagggcgcaaaaacccataacctaaaaaatattgatgttgag
ataccacgggataagctaactgttatcacaggattaagtggctctggtaaatcttcatta
gcttttgatactctatatgctgaagggcaaagaaggtatgttgagtcattatcttcatat
gcaagacagtttttgtcgatgatggataaaccagatgttgagcatatagaaggcctttct
ccagctatttcaatagatcaaaaaacaacatctcataatccaagatctacagttggaact
gtaacagagatatatgattatctgcgagtgttttttgcacgagctggtacaccaaaatgt
ccgatacatcaaatagaattgaaggctcaaactatcagccaaatggttgataaaattttg
gaatttgatgaagattcaagattgatgatactagcaccaattatttctcaaaaaaaaggt
acacatcatactttattagataagatattagcacaaggatatgttcgtgtgcgtataaat
gacgagttttataaccttgatgaagattatcctgaattggatcgttataaaaaacataat
attgatgtcgttattgatagatttaaacccaaaaaagagaacgaacaacgtatcgctgaa
tcaatagaaacagctttagaccttggtaatggtattgttaaattagcagatatggcaaat
caaactggcgatgatatcttattttcatcaaagcatgcttgtcctttgtgtgattttgca
cttaaagaattatcaccaagaattttttcttttaacagtccgttgggggcttgtagcagt
tgtgatggacttggtgttaaagaattttttgatgagcaaaaggttgttatagatccatca
atttcacttaagcatggagctatagttaagtggaataaaactaatcaatactatttttct
caattagagtctttagcaacacactacaaattttctttagatgagcggtttgagaagcta
cctaaaagaattcaagaaataatcttatatggttctggtgacgaagctatcgtaatgagt
gttgattctatcagaggaggtagacaaactcgtattaaaccttttgagggtgttatacct
cattttgaacgcagatattatgagtctgactcagatatggttaaaaaagatctttatgag
cttatgagtaaccttgaatgtaagtcttgtaatggtgcgagaattaatgaatatgcacgc
aatatatttattgctgataaaaatatagctgatgtttgtgctttgcctattgatgagtta
ttaaagtggttggatagtctaaagtttgtcggtcaacaacaagttatcgcagagaattta
ctcaaagagattaaactaagagtagagtttttagcaaatgttgggctagagtatttaagc
ttagcaaggcaagctgatactctctctggtggtgaggctcagcgtattcgtttagcaagt
cagataggcgctggtcttgttggtgtgatgtatatattagatgagccatcgatcggtctt
catcaaagggataatcaacgtttgcttgatgctttacataaccttaaaaatctaggtaat
actgtaatcgttgttgagcatgatgaggatgcgattcgtcaagcagattatataatcgat
atgggaccaatggcaggtgtacatggtggtgaggtagttgctgctggcggttatgaaacg
atactcaagagtaaaaagtctttaactgcagattatttaagtggtcgtagaaaaattgaa
gttccaaaaactaggctaaaagctagtaaaaatcgttatctagaaataagtggtgcggtc
ggtaataatcttcaaggagataatcttaaaatccctctaggggcattgacatgtgtgaca
ggtgtctcagggtcaggtaaatcaacgctgataaatagaactttatatcctttggcttct
cgtttactaaacagaagtattttagtaccaatgcagtatacctcacataaaggttttaat
caccttgataaggttatagatattgatcaatcaccaataggtagaactccacgctctaat
ccagcaacttatacgggagtgtttacacccatacgcgaattatttgctgcaacatcagaa
gctcgagctagaggatatattgctggaagatttagctttaatgttcgtggcggaagatgt
gaagcatgtcaaggtgatggcgttataaaggtagagatgcattttctcgcagatgtttat
gttgcttgtgatgtttgtcaaggcaagcgttataatcgcgaaactttagcggtgcaatac
aaaggtaaaaatatttacgaagtattggagatgactgtcgaagaggcacttgaattttat
gatgcagtaccaagtattaagactaagctggaagctttgatgaacgttggactgtcgtat
attaagctaggacaaagtgctactactctttctggtggtgaagcacaaagagttaaatta
gcaaaagagctatcaaaacgttcaactagtaaaaccttatatatattggatgagccgacc
actggtttacatttttatgatattcatcaacttctaaaagtaatcatggatctgcgtgat
aaaggtaatactgttgtaattattgaacataatttagatgtgataaaaatggcagattgg
cttgttgatttaggtccagaaggtggtagtaaaggagggcagataatttttgagggaact
ccagaggatataattaactgtaaaaaatcatacactggtaagtatcttaaagatttactc
tag
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