Fervidobacterium thailandense: U0O82_02210
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Entry
U0O82_02210 CDS
T11134
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
fthl Fervidobacterium thailandense
Pathway
fthl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fthl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U0O82_02210 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fthl03019
]
U0O82_02210 (rny)
Messenger RNA biogenesis [BR:
fthl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
U0O82_02210 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
MctB
FUSC
Cas3_HD
Spore_YhcN_YlaJ
Motif
Other DBs
NCBI-ProteinID:
XEY15064
LinkDB
All DBs
Position
complement(461064..462629)
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AA seq
521 aa
AA seq
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MEVLIYIIVGIIGISAGIAVGWIVGSRVGKKKAETEIEERLKKTRQDAESIIKEAEKEAL
EIKKKAIIEAREEAHLIREEIEKERKRREEEIKQLEDRLLKREEMLSKREELLDKRESFV
ENLKLELEAKAKELEQKEREVQEKFIQLAGLTAEQAREMVLQEAREKYEHEIAKIYVQIK
TRYEEEVDKYAKKIIADAIQRYAPEYTGEVTISTVALPNDDMKGRLIGREGRNIRTFEKI
TGVDLIIDDTPEMVTLSSFNPLRREIARRTIEKLIQDGRIHPARIEEMYEKAKAEIEREI
KEAGQEAVITVGVGGLHPEIIKLLGRLKFRTSYGQNVLAHSIEVAQIAGLLAAELGLNVD
KAKRGGLLHDIGKAVDHEVEGSHTVIGAELLKRYGESDEIINMIMAHHGEEEPMTPEAAI
VTAADAISAARPGARREDIESYIKRLMKLEEIAKSYKYVENAYAIQAGREIRVIVQPEKT
DDATIEKMAHDIAMRIENELQYPGVLKVVVIREKRSIAYAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggaagttttgatatacatcatcgttggaataataggaatctccgcgggaattgcggtt
gggtggatagttggtagtagggtaggtaaaaagaaagccgaaacggaaatcgaggaaagg
ctcaagaagacaagacaagatgccgagtcgataataaaagaagccgagaaagaagcgctg
gagataaagaaaaaagccatcatcgaggcacgtgaagaagcacacttgattcgcgaagag
atcgagaaagaacgcaagaggcgagaagaggaaataaaacagctcgaggatcgactattg
aagcgtgaagagatgttgagcaagcgtgaggagttgctcgacaaacgcgaaagtttcgtc
gaaaacttaaaactcgaactggaagcgaaggccaaagagctcgagcaaaaagaaagggaa
gtacaagaaaagttcatacaactggccggtctcaccgccgaacaagcgcgcgaaatggtg
ctccaggaagcccgggaaaagtacgaacacgagatcgcgaaaatctacgtccaaataaaa
acacgctacgaggaagaggttgataagtacgctaaaaaaatcattgcggatgccattcaa
cgctacgcgccggagtataccggagaagttaccatcagtaccgttgccttgcccaacgac
gatatgaagggacgactcataggtagggaaggtaggaacatcaggacctttgaaaaaatc
acgggtgttgaccttatcatcgacgataccccggaaatggtcacactcagttcgttcaac
ccacttagaagagaaatcgcccgaaggacgatcgaaaaactcattcaggacggtcgtatc
catccggcaaggatagaagagatgtacgagaaggcgaaagcggagatagagcgcgaaatc
aaagaagccggtcaggaagcggttatcacggtgggcgttggcggactccatccggaaatc
ataaaattactcggtcgactaaagttcaggaccagctacggtcaaaacgttcttgcgcac
tcgatagaagtggctcagattgccggcctcttggcggccgaacttggtttgaacgtcgat
aaggccaagcgtggagggctgttgcacgatattggtaaagcagttgaccacgaggttgag
ggttctcacactgtcatcggagctgaactactgaagaggtacggtgaatcggatgaaata
ataaacatgatcatggcacaccacggagaagaagaaccgatgaccccggaagcggcgatt
gtcacagctgcggacgcgatctcggccgcaagacccggtgcacgtagggaggatatagag
agctacatcaaacgtctcatgaaactcgaggaaattgccaagagctacaagtacgtcgaa
aatgcgtacgctattcaagccggtagagagattcgcgtcatagttcagccggaaaagacc
gacgatgcgacgattgaaaagatggcgcacgatattgccatgaggatcgagaacgaactc
cagtatcccggagtcttaaaagttgtggtgataagagaaaaacgctcgatagcgtacgcg
aagtaa
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