Fervidobacterium thailandense: U0O82_03685
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Entry
U0O82_03685 CDS
T11134
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
fthl Fervidobacterium thailandense
Pathway
fthl03030
DNA replication
fthl03430
Mismatch repair
fthl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fthl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
U0O82_03685
03430 Mismatch repair
U0O82_03685
03440 Homologous recombination
U0O82_03685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fthl03032
]
U0O82_03685
03400 DNA repair and recombination proteins [BR:
fthl03400
]
U0O82_03685
Enzymes [BR:
fthl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
U0O82_03685
DNA replication proteins [BR:
fthl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
U0O82_03685
DNA repair and recombination proteins [BR:
fthl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
U0O82_03685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
Rv2179c-like
tRNA_anti-codon
RNase_H_2
DNA_pol_A_exo1
HHH_3
DUF655
DEDDh_C
CAF1
Zn_ribbon_8
DUF7130
Flavi_DEAD
YhfH
Motif
Other DBs
NCBI-ProteinID:
XEY14824
LinkDB
All DBs
Position
754154..758305
Genome browser
AA seq
1383 aa
AA seq
DB search
MIYTFKVSKPLSNIGKKLGLDVSGVLKRVIYDRQRQCVTFVVENFSGELESFRESLCNYI
GVHVEVLNEKSENHSQLSETELKERTFRLLNGSGRYLDRIEIDGDRLIIYAIGEFGKSHI
LSRLKKVKPQLPFKEFVVELSNVEVKIDPKEVLTQVSTISTDSSNPDDGGADDVIDLTRE
KIEEFLKNIYSPSNMPQTKKRSKLYGKVFKIDRPSEEVLNVYITDKKDSTLCKFFNSKAK
LYGDKISEGKWYIFTGTLDVDKFGVTFFKSENATEIPPLDRMDNAPQKRVELHAHTKMSD
LDSVLSVEEYVRVARDWGWKALAVTDHGNVQAIPEFYELASSNGLKPIFGAELYVAHDPK
QIMINPIDGEISEATYVVIDLETTGLNPRQDEIMEIGAVKTRNGEVIEEFHTFVKPDQLK
EKSLRITGITEEMLKNAPRIEDVVGKLYEFLGGCVIVAHNADFDVTFLQNTFSKFGFSFN
PPYIDTLRLANALLKNKIKSFSLDKLVDYFGLGTFQHHRALDDARITVKVFWKLIDLAKK
RSITTFDKLNKLVETINPLTKHPKHLTVLVRNRTGLKNLYKLISKSHTETFFTVPQVLRS
DLETHREGLLIGTGCPNSEIFEIALKGDRGALLEALKFYDYVEIVPLDTIVSEEFTPEEA
KEAYKLLYEVAKELNMPVVMVSNAHFLDPEDIKARKVLLAPQSNVEDAEANYYLRTTEEM
LRAAFEIFESEGIAEEVVIHNPNRIAESIEEIKPVEKKLHPPKIEGAEERLREMTYQKAY
ELYGNPLPELVEKRIERELNSIIGHGYAVLYMIAHLIVKKAAEDGYVVGSRGSVGSSLVA
HLVGITEVNPLPAHYRCPDCKYVEFHEEYGSGYDLPNKRCPRCGAKLQKAGQDIPFEVFM
GFEGDKVPDIDLNFSGEYQERAHRYIEELFGKSYVFRAGTINTIADRSAVGFVKSYMEDK
TGKIVNPLHPAEQERLAMYVTGVKRTTGQHPGGLMIVPSDMDIHDFTPYQYPANDKKAGV
FTTHFAYESIHDDLVKLDALGHDDPTMIKLLHEYSGVDPMTVPMDDKDTMSIFSSVKVLK
VDPEELGTDVGTIGIPEFGTDFVMGMLRETRPKTFAELVRISGLSHGTDVWLGNAQTLIQ
KKIATLSEVISCRDDIMLYLIHKGVPPAAAFKIMENVRKGKGLKEEEVQLMKEYGVPDWF
IESCQKIKYLFPKAHAVAYVSMAFRIAYFKVHYPLAFYAAFFSTKGDEFDAEFILKGKDA
IKRRLNELAANVKKDVKEKNEEKVLQAALEMMLRGFGFKKPDLRRSDATRFIIDGKDLII
PFNKIRGIGENVARAIVEKRNEKMYTSVEDLANRAKVTKAQIEVLRRLGVLDGLPETDQA
TLF
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atgatctacacgttcaaagtttcaaaaccgttgagtaatattgggaagaaattaggtctt
gatgtttccggtgtgctaaagcgcgtaatttacgataggcaacgccagtgtgtgaccttc
gttgtggagaacttttccggagagctcgaaagcttccgggaatctttgtgcaactacata
ggcgtgcacgttgaggtgttgaatgaaaaatccgaaaatcattctcagttgagcgagact
gagttaaaagaacgcacctttcgcttactcaacggctccgggaggtaccttgacaggatc
gaaatcgatggtgacagacttattatctacgcgataggtgagttcggtaagagtcatatc
ctctcgaggctaaaaaaagtaaagccacaacttcccttcaaagagtttgttgttgagttg
agtaacgttgaggtgaagatagatcccaaagaagtcctaacccaggtcagtacaatttcg
actgactcatcgaaccccgatgacggcggagccgatgatgtaatcgatttgaccagagaa
aaaattgaagagttcctcaagaacatatattcaccttcgaacatgccccagacgaagaaa
aggtcaaaactttacggcaaggttttcaaaatcgatagaccgtcggaagaggttttaaac
gtctacatcacagataaaaaggattcaacactttgcaaatttttcaattccaaggcaaaa
ttatacggagacaaaatctccgagggtaagtggtacatttttaccggcaccttggacgtg
gacaaattcggagtaacgttcttcaaaagcgagaacgcaaccgagattccaccgctcgac
aggatggataacgcccctcaaaagcgcgtagaactgcacgcgcacacaaagatgagcgac
ctggacagcgttctgagcgttgaagagtacgtccgcgttgcacgggactggggttggaag
gctctcgcggttacggatcatggaaacgttcaggcaatacccgagttctacgagttggca
tcgtcaaacggtttgaaacccattttcggtgccgagttgtacgttgcacacgatcccaaa
cagatcatgataaatcccatcgatggcgagatttccgaagctacttacgtcgttattgac
cttgaaacgacggggctcaacccaagacaggacgaaatcatggaaataggagctgttaaa
acaagaaacggggaagtgatcgaagaattccacacgttcgttaaaccggaccagttgaag
gaaaaaagccttaggataacaggaatcaccgaagagatgttgaaaaacgctccacggata
gaggatgtggttggtaaactctacgagttcctcggaggttgcgttattgttgcacacaac
gcggactttgacgtcacttttcttcagaacaccttctcgaaattcggtttcagcttcaac
ccaccgtacatcgatacactcaggcttgccaacgcgctcttgaagaacaagataaaatca
ttctctctcgataaactcgtcgattacttcgggctcgggactttccagcaccacagggct
ctcgacgatgcgaggatcacggtgaaggtcttctggaaactcatagaccttgccaagaag
agatcgataacgaccttcgataagttgaacaaactcgtcgaaacgatcaacccgctaaca
aagcatccaaaacaccttaccgtactcgtacggaatagaacgggtttaaaaaacctctac
aaactcatctcaaaatcccacacggaaaccttcttcaccgttccacaggtgctacgttcc
gatctggagactcaccgggaaggtttactcataggtaccgggtgcccgaactccgagatt
tttgagatcgcattaaaaggtgacagaggggcactacttgaagcactcaaattctacgat
tatgtcgaaatcgtcccactggacacgatcgtttccgaggaattcacaccggaagaggcc
aaagaagcctacaagcttctgtacgaagttgcaaaggaattgaacatgccggttgtcatg
gtgtcgaacgcgcactttttggatcccgaggacatcaaagccagaaaggtactcctcgca
ccacagagtaacgtcgaggacgcggaggcaaattattacctcagaacaacggaagaaatg
ctcagagcggcttttgagatattcgaaagcgagggaatcgccgaggaggtagtcatccac
aatccaaacaggatcgccgagagtattgaagagattaaaccagttgaaaagaaactacac
ccaccgaaaattgagggtgcagaagagcgtctcagggaaatgacctaccaaaaggcttac
gagctctacggaaacccgctcccggagcttgttgaaaagcgcattgagagggaactcaac
agcatcatagggcacggttacgccgtgctttatatgatagctcacctgattgttaagaaa
gctgccgaagatggctacgtggtcggttcacgtggctcggtaggttcgtcgctcgttgcc
caccttgtgggaataaccgaggtcaatccactgccggcacactacagatgtccggattgt
aagtacgtggagttccacgaggagtacggctcaggatacgatctaccaaataaacgctgc
ccaaggtgtggcgcaaaactacaaaaggctggacaggatataccgttcgaagttttcatg
ggctttgagggagataaggttccagatattgatttgaacttctcgggcgagtaccaggaa
cgagcgcacaggtacatagaagaactgttcggaaagtcttacgtctttagggccggtacg
ataaacacgatcgccgacagaagcgcggtcggtttcgttaaatcttacatggaggacaaa
accggtaagatcgtcaaccccctccacccggccgagcaagagcgtcttgccatgtacgtt
acgggagttaaacgtacgaccggtcaacatccgggaggattgatgatagttcccagcgac
atggatatccacgacttcactccgtatcaatacccggcgaacgacaagaaggccggcgtc
ttcaccacacactttgcgtacgaatccattcacgacgaccttgtaaagctcgatgcgctc
ggtcacgatgatccaacgatgataaaactcctccacgaatacagcggagtggatccgatg
accgttccgatggacgataaagacaccatgagcatcttctcgtccgtaaaagtcctcaag
gttgatccggaggagctgggaacggacgtgggaacgatagggattcccgaatttggtacg
gattttgtcatgggaatgctgcgcgagacaaggccgaagacatttgccgagctcgtgagg
atttccgggctttcgcacggaacagacgtgtggctcggaaatgcgcagacactcatccag
aagaaaattgccacactttcggaggttatctcatgtcgtgacgacatcatgctttatctc
atccacaaaggagtaccacccgcggcggcgttcaagatcatggagaacgttcgaaaaggt
aaaggattgaaggaagaggaagttcagttgatgaaagagtacggtgtaccggattggttc
atagagtcatgtcagaagatcaagtacctctttccaaaggcgcacgccgtggcttatgtg
agtatggcattcagaatcgcgtactttaaagtccattaccctcttgccttctacgcggcc
ttcttttccacaaaaggtgacgaattcgacgccgagttcatacttaaaggtaaagatgcg
ataaagcgtagactaaacgagctggctgcgaacgttaagaaagacgtcaaagaaaagaac
gaagaaaaagtactccaggccgcactcgagatgatgctcaggggatttggattcaaaaag
ccagatttacgaagaagcgatgcaacgaggttcatcatcgatggaaaggacctcatcatc
ccgttcaacaaaatccgtggtataggtgagaacgttgcccgcgcgatagttgagaaaaga
aatgagaagatgtacacctcggtagaggatttggcaaaccgtgcaaaagtgacgaaagcg
caaatcgaagtactcagaaggctcggggtactcgacggtctacccgaaacggatcaggct
acactcttctga
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