Fervidobacterium thailandense: U0O82_05005
Help
Entry
U0O82_05005 CDS
T11134
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fthl Fervidobacterium thailandense
Brite
KEGG Orthology (KO) [BR:
fthl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fthl03032
]
U0O82_05005 (topA)
03400 DNA repair and recombination proteins [BR:
fthl03400
]
U0O82_05005 (topA)
Enzymes [BR:
fthl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
U0O82_05005 (topA)
DNA replication proteins [BR:
fthl03032
]
Prokaryotic type
DNA Topoisomerases
U0O82_05005 (topA)
DNA repair and recombination proteins [BR:
fthl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
U0O82_05005 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
XEY13289
LinkDB
All DBs
Position
complement(1056730..1058730)
Genome browser
AA seq
666 aa
AA seq
DB search
MAQKSDKTDKKKVIIVESPAKAKTIENILGEEYLVLSSKGHVRDLPQKDFGVDLKTLEME
FEIIPGKESVVQHLKEATQGKEVLLASDPDREGEAIAWHLSTLLNVKGKNRITFSEITPR
AIKEAVQSPREIDMNKVNAQLARRVLDRIVGYKISPLLWRIMKDAKSAGRVQSAALKIVC
ERERERVKFVPQKFFKIWVEVAGLKAYLTKVDGKKVKPTDVTKEIADEVSKSVRQVRLIN
VDIKEVKKNPPQPFITSTLQQDASSKLGFPVSKTMKIAQELYEGIDTPEGHIAFITYMRT
DSTRVSEEAKEAAADFIAKHFGEQYVGEGVKKAREKTKAKVQDAHECIRPVDVFLTPEAA
KKLLDRDHYRLYELIWKRFIASQMTPAVYKQFSYDFESGPYLFEATARERLFDGFESVYS
VDDEKPETHKELKVNETYAVEPKVQESETTPPDRFTEASLVKTLESEGIGRPSTYATIIQ
TLLDRKYVVKKKRALVPTILGFIVNEYLEERFPDVVDKNFTAEMEKELDEVENGKKDWKT
VIRDFLKEFSKDLMNAEKEFFSIDYETDLTCNCGKNFYLKVGKFGLYLLCKNCNKTSKVD
PERIGVIVDGKALFNLRSEASEPGREEANENSDELPNVAEEHAVQRSYRYKRSTSPSGSG
KKRKKT
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcccagaagagcgataaaaccgacaaaaagaaggtaataatcgttgaatccccggca
aaggcgaaaacaatagaaaacatccttggtgaagagtatcttgtcctctcctcaaaagga
catgttagagacctcccacaaaaggatttcggtgtcgatctgaaaaccctcgagatggag
ttcgaaatcatcccggggaaagaaagtgtcgttcagcatctcaaagaagctacacaaggc
aaggaggttttactcgcttcagacccggatagagaaggtgaggctattgcttggcacctg
tccacattgctgaacgttaagggaaaaaatagaataacattctcggaaataacccctcgg
gctatcaaagaagcagtccaatcgccgagggaaatagacatgaacaaggtcaacgcccaa
ctggctcgtcgggtcctcgaccgtatcgtcgggtacaaaatcagtccacttctctggcgg
ataatgaaagacgctaagagtgccggtagagtccaatcagcagctctgaaaatcgtatgc
gaacgcgagagagaacgtgtaaaattcgttccccagaaattcttcaaaatctgggtggaa
gttgccggcctaaaggcctacctgacgaaggtggatggcaaaaaggttaaaccgacggat
gttaccaaggaaatcgcggacgaggtctcaaaaagcgttcgtcaagtccgcttgattaac
gtagatatcaaggaagtcaagaaaaatccaccgcaacctttcatcacaagtacattacag
caagacgcttcgagtaaactgggctttcccgtttccaaaacgatgaaaatagcacaggaa
ctgtacgaagggattgacacacctgaaggccacatcgcatttatcacgtacatgcgtacg
gattccacacgcgtttcggaagaagcgaaagaagccgccgcggatttcatcgcaaagcac
tttggagaacaatacgttggtgaaggggttaaaaaagcacgtgaaaagactaaagcaaaa
gtccaagacgcacacgaatgtatccgtcccgtggacgtttttctaacacccgaggcagcg
aagaaattactcgaccgagatcactacagactttacgagcttatctggaaacgcttcatc
gcatcgcagatgacaccggctgtatacaaacagttcagttacgatttcgaaagtggaccg
tatcttttcgaagccacagcacgggaaagattgttcgacggttttgagagtgtgtattca
gtcgacgatgagaagcccgaaacacacaaagagcttaaggtgaacgagacatacgcggtc
gaaccgaaggtccaagaatctgaaacaaccccacccgacaggttcacggaggcgagcctt
gtcaaaacgctggaaagtgaaggtatcggtcgtccaagcacgtacgctaccataatccaa
acactcttagatagaaaatacgttgtgaagaagaaacgtgctttggttccgacgatactt
ggctttatcgttaacgagtatctcgaagaaagattccccgacgttgtggataaaaacttc
accgcggagatggaaaaagagctcgacgaagttgagaacggtaaaaaggactggaaaacc
gttattagggacttcttaaaggagttttccaaagacctcatgaacgccgaaaaggaattt
ttcagcatagattacgaaactgatctaacgtgcaactgcgggaaaaacttttacctaaag
gttggaaagttcggcctttaccttctgtgtaagaattgcaacaagaccagcaaagtagat
ccagaaaggatcggtgttatcgttgacggaaaagctttgttcaacttgcgaagtgaggca
tcggaacccggtagagaagaggcaaacgaaaacagtgatgaattgccaaacgttgccgaa
gagcatgcagttcaacgctcgtaccggtacaaaaggtcgactagtccttccggatctgga
aagaaacggaagaagacgtag
DBGET
integrated database retrieval system
