Fervidobacterium thailandense: U0O82_05010
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Entry
U0O82_05010 CDS
T11134
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
fthl Fervidobacterium thailandense
Brite
KEGG Orthology (KO) [BR:
fthl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fthl03019
]
U0O82_05010
Messenger RNA biogenesis [BR:
fthl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
U0O82_05010
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HDOD
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
XEY13290
LinkDB
All DBs
Position
complement(1058792..1059775)
Genome browser
AA seq
327 aa
AA seq
DB search
MNIPREILEKFSYPYVADLGSYLDKEIDGIFKVKSKKLQETKDGKKFLLITLEDRTGSVR
AVDWYNAESNDQLVEVGSIVNVTGKVVYFEDRIQINIANDPRAIKKLSENDYDIERFVSK
ASNVDEMFNELLELISTVKDSDYRRILNAFFLEDKSFVETFKNAPAGVRIHHAYIGGLLE
HSLNVAKIADKVAQVYPQLDRDLLIAGALLHDVGKVKEYTVTQKGIEVTTDGELLGHIIM
GVEMLERKGRNIPPEKLIKLKHIIASHHGEFEWGAPVLPKTPEALVLHFIENMDSKVNRV
FGIIEKEDNGKEWSEYDTNLSRRFLLK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtgaacataccgagggagattttggagaagttttcgtatccttacgttgccgatctgggt
tcgtatctggataaggaaatcgacggtattttcaaggtcaagagcaagaaactccaggag
acaaaagacggtaagaaatttttgctgataactttggaagatagaaccggtagtgttcgt
gctgtagactggtacaacgcggagtcaaacgaccaactcgtggaagttggctccattgtt
aacgtgacgggcaaagtcgtttacttcgaggacaggatccagatcaacatcgcaaacgac
ccaagggcgataaagaaactttcagaaaacgactacgacatcgaacgtttcgtttcgaaa
gcctccaacgtggacgagatgttcaacgaactgttggagctcatatccaccgtgaaggat
tcggactaccgaagaatattaaacgcgtttttcttggaagacaaatcttttgtcgaaact
tttaagaacgcacctgctggtgtccgaatccaccatgcgtacataggaggattactcgag
cattcactaaacgttgcaaaaattgccgataaggtagctcaggtgtacccacaactggac
cgtgaccttctcatagctggggcactgctgcacgacgtgggaaaggtaaaagagtacacc
gtcacgcaaaagggaatagaagttaccaccgacggagagttgctgggacacatcattatg
ggagttgaaatgctcgagcgaaaaggccgaaatattccccccgaaaaactcatcaagttg
aaacatatcattgcgtcccatcacggtgaattcgaatggggggctcccgtgctaccgaag
acaccggaggcacttgtgctccatttcattgaaaacatggactcgaaagtaaaccgcgtg
ttcggaattatagagaaagaagataacggtaaggaatggagcgagtacgacaccaacttg
agtaggagattccttttgaagtag
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