Fervidobacterium thailandense: U0O82_09720
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Entry
U0O82_09720 CDS
T11134
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fthl Fervidobacterium thailandense
Pathway
fthl03420
Nucleotide excision repair
fthl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fthl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
U0O82_09720
03430 Mismatch repair
U0O82_09720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fthl03400
]
U0O82_09720
Enzymes [BR:
fthl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U0O82_09720
DNA repair and recombination proteins [BR:
fthl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
U0O82_09720
MMR (mismatch excision repair)
Other MMR factors
U0O82_09720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
HEPN
DEAD
ResIII
NAT10_TcmA_helicase
Cas_NE0113
RACo_linker
Motif
Other DBs
NCBI-ProteinID:
XEY14136
LinkDB
All DBs
Position
2040727..2042688
Genome browser
AA seq
653 aa
AA seq
DB search
MDDREYREYVEYRLDRGKISEQSETLVPEKLRFLEELDEEQREAVLNSSGRTVVIAGPGS
GKTRVITYKIAYLLQTGIKPSEIVLVTFTRAAAKEMIERAQRVTKKDLGEMTAGTFHHVC
NVILRRYGSVIGIRPNFTILDESDSKDLMKIVRARFATSKQMSKALPTVAELYSLLTYSN
NTLQSPYEVVSKKAKRWLNVVDVIERIFEEYSLEKDKQNVLDYDDLLLKTLYLLENYPDI
RERISSKFRWILVDEFQDTNIVQLKIVEFLSQVHGNIFVVADDAQSIYSFRGARFENVKE
IMKGANVFKIQTNYRSTDKIVELVNSMIPSSSVPKRLRAVRVGSQKPVIVNTYDHFDEAK
FVAQRILEHVNEGTSYEDIAVIYRAHSHSLELQVELSKRNIPFRVLSGLRFTETAHAKDV
IAFLKVLQNPYDALSWMRVLKLLENVGDVTAEKIVTQLLESESPIDTLMQLSVKSNDFSN
FKEIVLSSLGKQPSTQIRRFYEGFYQMYLETHYPDFRDREEDVERLIEMAEFYDTTEDFL
NDITVSEDITRTGMEKEEGKVTLTTVHQAKGLEWRVVFVIGVNPGDFPHFLAVKEGNLDE
EERLFYVAITRAKDYLYITHSLFSRRDYGPFNEIQRDFIEDIPRYLVEYWRVR
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggacgatagggaatacagggagtacgtcgagtacaggcttgatagaggtaagatatcg
gaacagtcggaaacgttggttccggagaaattgagatttcttgaagagctcgatgaggag
caacgagaagcggtactgaactcgagtggtcgaacggtggtaatcgccggccctggaagt
ggtaagacacgggtaatcacgtataaaatagcgtacctgttgcaaacggggataaaaccc
tcagaaatcgtcttggtgacgttcacccgggctgctgccaaggagatgatcgaacgtgca
caacgcgtaacgaagaaggacctcggagagatgactgctggtacgttccaccatgtgtgc
aatgttatcctccgacggtacggtagcgtgattgggataagaccgaacttcacaatcctt
gacgagtcggattcaaaagacctcatgaaaattgtacgggcgcgctttgcgacctcaaag
cagatgtccaaggcacttcccacagtcgccgagttgtattcgttacttacatactcaaac
aacacgctccaaagtccttacgaagttgtttctaaaaaggccaaacggtggcttaatgtg
gtggacgtgatagaaaggattttcgaggagtattcccttgaaaaagataagcaaaatgtc
ctcgactacgacgatctgctacttaagacgctgtatcttttggaaaactatccagatatt
cgtgaaaggataagctccaagttcagatggatcctcgttgacgaatttcaggacacgaac
atcgttcagttgaagattgtcgaattcctctcccaggtacacggtaacattttcgtcgtt
gccgacgatgcccagagcatttattccttccgtggggcaaggttcgaaaacgttaaggaa
atcatgaaaggtgcgaatgtgtttaagatacagaccaactacaggagcacagataaaatc
gttgagctcgtgaactcgatgatacccagcagttcggttccaaagcgtttgagggctgta
cgcgtaggttcgcaaaagccagttattgtcaacacgtacgatcactttgatgaagccaag
ttcgttgcgcagaggatattggagcacgttaacgaaggaacgagctacgaagatatagcg
gttatctacagggcacattcgcactctctggaactgcaagtggaactttccaaacggaac
atacccttccgcgtgctttccggactccgattcaccgaaacagcacacgcgaaagatgtt
attgcttttctaaaagtgcttcaaaatccgtacgatgcgctttcttggatgcgtgtgcta
aaattgcttgaaaatgtgggtgatgtaaccgccgagaagatagtcacgcagttactggaa
agtgaatcaccgatcgacactttgatgcagcttagtgttaagagcaacgatttctcgaat
ttcaaagaaattgtgctctcaagtcttggcaagcaaccttccacgcagatacgtagattc
tacgagggattctatcaaatgtaccttgaaacgcactatcctgatttccgtgacagggaa
gaagacgtggagcgactgatcgaaatggccgaattctacgatacgactgaagatttcctc
aacgacatcactgtttccgaagatataacacgaaccgggatggaaaaagaagaaggtaaa
gttacgctgacgactgttcaccaggccaaggggttggaatggcgtgtggttttcgtcatc
ggtgtcaacccaggcgactttccacactttcttgcggttaaagagggaaacctcgacgaa
gaggaacgccttttttacgttgccataacgagggcaaaggattatctgtacataacccac
tcgctcttctccagaagagactacggacccttcaacgaaattcaacgtgatttcatcgag
gacattccgagataccttgtagaatactggagagttcgctaa
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