Francisella tularensis subsp. holarctica FSC200: FTS_0609
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Entry
FTS_0609 CDS
T02350
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
fti
Francisella tularensis subsp. holarctica FSC200
Pathway
fti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FTS_0609 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fti03021
]
FTS_0609 (rho)
03019 Messenger RNA biogenesis [BR:
fti03019
]
FTS_0609 (rho)
Transcription machinery [BR:
fti03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FTS_0609 (rho)
Messenger RNA biogenesis [BR:
fti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FTS_0609 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
NACHT
AAA
ResIII
S1CSD-TOTE-2
AAA_22
DUF3086
Motif
Other DBs
NCBI-ProteinID:
AFT92508
LinkDB
All DBs
Position
complement(602845..604107)
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AA seq
420 aa
AA seq
DB search
MNLNELKYKSVNELMDIAQSLDLESLRARKQELIFSILKYHADKGEDIYGEGILEVLQDG
YGFLRSSDSSYFASPDDIYVSPAFIRKLNLRTGDSIVGKIRPPRENEKYFAVKHIDSVNF
DSPELARKKILFENLTPEYAKERLTMEIGNGSNEDITARVIDLAAPFGKGQRGLIVAPPK
TGKTIMMQNIATSIAKNHPECNLIMLLIDERPEEVTEMQRSVRGEVVASTFDEPAARHVQ
LAEIVIEKAKRLVEHKQDVVILLDSITRLARAYNTVSPASGRVLSGGVEANALQKPKRFF
GAARNTAEGGSLTIIATALVETGSKMDEVIFEEFKGTGNMELHLDRKIAERRVFPAISFD
RSGTRREELLTTPEELQKLWVLRKILGGMEDVQAMEFLTEKMKGSLTNEEFFETMKRGAI
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaaatgaattaaagtataaatctgttaatgagctaatggatatagctcaaagt
ctagatcttgagtcacttcgtgccagaaaacaagagctaatcttctcaattctaaagtac
cacgctgataaaggtgaagacatttatggtgaaggtattttagaagtcctacaagatggc
tatggctttctaagatcttctgatagctcgtacttcgcctctccagatgatatctatgtt
tcacctgcttttattagaaaactaaatctgcgtactggtgatagtattgtcggtaagatt
cgtccgcctcgtgaaaatgagaaatactttgctgtcaaacacatcgatagtgttaacttt
gattctccagaattagctagaaagaaaattttatttgagaacctaactcctgagtatgct
aaagaaaggctaactatggaaattggaaacggctcaaatgaggatattactgctagagtt
atagatttagcggcaccatttggtaaaggtcagcgtggcttgattgttgcaccacctaaa
actggtaagacaatcatgatgcaaaatatcgcaacgtctattgccaaaaatcatccagag
tgtaatctaatcatgctactaattgatgagcgtcctgaggaagttaccgaaatgcaacgc
tccgtgcgaggtgaggtagttgcatctacgtttgatgaaccagctgcacgccatgtccaa
ttagctgaaattgtaatcgaaaaagccaaaagattagttgagcacaaacaagatgtagta
atcttacttgactcaatcacaagactagctcgtgcatacaataccgtatctccagcgtct
ggtcgtgtactatctggtggtgtagaggcaaacgccttacaaaaaccaaaaagattcttt
ggtgctgcgcgtaatactgccgaaggtggtagcttgacaatcattgcaactgctcttgtc
gaaactggttcaaaaatggatgaagttatctttgaagaattcaaaggcacaggtaacatg
gagcttcatcttgatcgtaagattgctgagcgccgcgtcttccctgctattagctttgat
agatctggtacacgtagagaagaactacttactactccagaagagctacaaaaactttgg
gtgctgcgtaagattcttggtggtatggaagatgtccaagctatggaattcttaacagag
aaaatgaaaggctcactaactaatgaagaattctttgaaactatgaaaagaggcgctatt
tag
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