Francisella tularensis subsp. holarctica FSC200: FTS_1501
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Entry
FTS_1501 CDS
T02350
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fti
Francisella tularensis subsp. holarctica FSC200
Pathway
fti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FTS_1501 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fti03019
]
FTS_1501 (pnp)
03016 Transfer RNA biogenesis [BR:
fti03016
]
FTS_1501 (pnp)
Enzymes [BR:
fti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FTS_1501 (pnp)
Messenger RNA biogenesis [BR:
fti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FTS_1501 (pnp)
Transfer RNA biogenesis [BR:
fti03016
]
Prokaryotic type
tRNA degradation factors
FTS_1501 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
S1_RRP5
KH_2
RecX_HTH2
Motif
Other DBs
NCBI-ProteinID:
AFT93182
LinkDB
All DBs
Position
complement(1463489..1465570)
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AA seq
693 aa
AA seq
DB search
MKIFREVFELGNKEIILETGGMARQADGSVTVSCGNNVVLVTTVVKKSVADGTDFFPLSV
HYLEKTYAAGKIPGGFLRREGRPSEEQILISRLIDRSIRPSFPDGFFNEIQIVATVLSYD
GAFSPDILALIGASASLAISGAPYDDVVAGVRVGYTNGKYILNPNKQDLRDSDLDLVVSG
TYDAILMVESEANSLPESVMLGGILYAHKHLKTIINSINRLAKVASKPRIEYSIYQINKF
LKSQIKSQFFGEIKNTYTIASKQERNLKLNAIRKNVLEYIFSSDVDGNEYTEKEILEAFH
DIEKDLVRSNILEGKPRIDGRCTETIRPINVKIGVLPGVHGSALFTRGETQALVVTTLGS
DRDAQLVESLDGIEKCRYMLHYNFPPYSVGECGMVGMAPKRREIGHANLAKRATQAVFPN
EEAYPYVVRVVSEILESNGSSSMATVCGSSLSMMDAGVPIAEPVAGIAMGLIKDGAKYAV
LSDILGDEDHLGDMDFKVAGTRYGVTALQMDIKIKGISREILEQALEQARVGRLHILGIM
NEVIKEHKEAVSDVAPQIHVMNINPAKIKDVVGRGGATVKGIVEKTGAQIDTSDSGEVKV
FAKDKKSMDMAVAMIEEIVAEVEEGQVYKGKIVKLLDSGVFVNLLGSQDGYLPFSEIEQA
GMKTNSLVEGQGLEVLVQNIDRGGRVKLSLVAR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatatttagagaagtttttgaactaggtaacaaagaaataattcttgaaacaggt
ggtatggcacgtcaagcagatgggtcagtgactgtaagttgtgggaataatgttgtattg
gtgacaacagtagttaaaaaatcagtagctgatggtactgacttttttccgttatctgtg
cattatttagagaaaacttacgctgctggtaaaataccgggtggtttcttaagaagagag
ggaagaccttcagaagaacaaattcttatttctaggctaatagacagatctataagacca
tcatttccagatgggttttttaacgaaattcaaatcgttgctacagttttatcttatgat
ggtgctttttcacctgatatactagctttaataggtgcttcggcatctttagcaatatct
ggagcaccttacgatgatgttgttgctggtgtaagagtgggttatacaaatggtaagtat
attcttaatccaaataaacaggatttgagagattcagatctagatctagtagtctctgga
acatatgatgctattttaatggttgaatctgaagctaatagccttccagaatctgttatg
cttggtggtatcttatatgcgcacaagcatttaaaaactattattaactcgattaataga
cttgctaaagtagcatctaaacctcgtatagaatattctatatatcaaatcaacaagttt
cttaaatcacaaattaagtcacaattttttggtgaaattaagaatacctatactatagcg
tcaaagcaagaaagaaacttaaaacttaatgcaattagaaaaaatgttcttgagtatatt
ttctctagtgatgttgatggtaacgagtatactgaaaaagaaatattagaagctttccac
gatattgaaaaagatcttgtaagatcaaatattcttgagggtaaaccaagaatagatggt
agatgtacagagactatccgacctatcaatgtcaaaataggtgttttaccgggggtacat
ggatctgctttatttacacgtggtgagactcaagctttagttgtaactactttaggtagt
gatagagatgcacagcttgtggaatctttagatggcatagagaaatgtcgttatatgttg
cattataactttccaccatattctgtgggagagtgtggtatggttggtatggctccaaag
cgtcgcgagattggtcatgctaacttagctaagcgcgcaactcaagcagtattccctaat
gaagaagcatacccgtatgttgttagagttgtctctgaaattctagagtcaaatggttca
agctctatggcgacagtatgtggttcttctttatcaatgatggatgctggtgtaccaatt
gctgagccagtagcaggtattgctatgggacttattaaagatggtgcaaaatatgctgtg
ttatcagatattctaggcgatgaagatcatttgggtgatatggattttaaagttgctggt
actagatatggtgttacagcattacagatggatattaaaatcaaaggcatctcaagagaa
attcttgagcaagcattagagcaggcaagagtaggtagattacatattctaggaatcatg
aatgaagtaataaaagagcataaagaagctgtatctgatgtggcgccacaaattcatgtg
atgaatataaatcctgctaaaattaaagatgtcgttggtcgaggaggtgctactgtaaaa
ggtatagttgagaagactggtgcacaaattgatactagtgattctggtgaagttaaggtt
tttgctaaagacaaaaaatctatggatatggctgtagcaatgatagaagaaatcgttgca
gaagtggaagaagggcaagtttacaagggcaaaatagttaagcttttagattctggagta
tttgttaatcttcttggtagtcaagatggatatttaccattctctgaaattgaacaagct
ggcatgaaaactaactcgttagtagaaggtcaaggattagaagttttagttcaaaatatc
gatagaggtggtagagttaaactttctcttgtagcgaggtaa
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