Frigoriglobus tundricola: FTUN_0556
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Entry
FTUN_0556 CDS
T06871
Name
(GenBank) Formate hydrogenlyase transcriptional activator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
ftj
Frigoriglobus tundricola
Brite
KEGG Orthology (KO) [BR:
ftj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ftj03000
]
FTUN_0556
Transcription factors [BR:
ftj03000
]
Prokaryotic type
Helix-turn-helix
Other families
FTUN_0556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
AAA_5
PAS_4
AAA
HTH_8
PAS_9
PAS_8
GAF_2
HTH_30
Mg_chelatase
MCM
IstB_IS21
AAA_16
PAS_3
AAA_3
PAS
AAA_30
Parvo_NS1
nSTAND3
AAA_22
AAA_2
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QJW93056
UniProt:
A0A6M5YIG5
LinkDB
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Position
complement(620016..621914)
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AA seq
632 aa
AA seq
DB search
MSDSEQPADREEVAALRAIVEGTARYTGEEFFRSLVRNLSAATGVPNAFVAEFADQRTRV
RSLAYWENGRFLPPDEWDLAGTPCEDVLEGNFCHHPTDVRHKFASDPGSAEVESYLGVPL
RDANGAVLGHLAVFDTKPMPPEPRLLYTFQIFAARAAAELDRLKFEKMLKDSEERFRDLF
EEAPIAYVHEDLDSRFLRANRTALRILGLKPEEVAGTVGTALVPDTPEARRRVKDAFASI
SRGTDPGGLVLELCRKDDGRSVWVQWWSRPDPGGKFTRTMFIDVTERVLMEQEKARLQQQ
NRYLQEEIKAAHNFDEIVGRSPALVSVLQRVSKVAGTDSTVLITGETGTGKELVARAIHS
ASPRKGKPLIKLNCAALPAGLVESELFGHEKGAFTGATARKAGRFELADGGTLFLDEVGE
LPLETQAKLLRVLQEREFDRVGGTAPVKADVRVIAATNRDLAKMAKEGKLREDLFYRLNV
FPVRLPPLRERTGDIPLLVRFFVNRFAGRMGKRIETVSRETLDLLVAYSWPGNIRELENV
LERAVILSDGPELEIDPEVLPVAGATVDSASPDESGQNLVRVETDHIRGVLTQTGWVIEG
PNGAAKVLGLHPNTLRSRMKKLGISRPGHDAT
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactcggagcaacccgccgaccgcgaggaagtcgcggccctccgcgcgatcgtc
gagggcaccgcccggtacacgggcgaagaattcttccgctcgctcgtgcggaacctcagc
gccgcgaccggtgtcccgaacgcgttcgtcgccgagttcgccgaccagcggacgcgggtc
cggtcgctcgcgtactgggagaacggccggttcctcccgccggacgagtgggatctggcc
ggcaccccgtgcgaggacgtgctcgaggggaatttctgccaccacccgaccgacgtgcgg
cacaaattcgcgtcggaccccggctcagcggaggtggagagctatctgggtgtgccgctc
cgtgacgccaacggcgccgttctcgggcacctcgcggtgttcgataccaaaccgatgccc
cccgaaccgcggttgctgtacacgtttcagatcttcgccgcccgcgccgccgccgaactg
gaccgcttgaagttcgagaagatgctgaaggacagcgaggagcgctttcgcgacctgttc
gaagaggcgccgatcgcgtacgtccacgaagaccttgattcccggttcctgcgcgccaac
cgcacggccctccgcatcctcggtctcaaaccggaggaggtggccggcaccgtcggcacc
gcactcgtgcccgacacgccggaagcccggcggcgcgtgaaagacgcgttcgcgtcgatc
agccgcggcaccgacccgggtggcctcgtgctcgaactgtgccgcaaggacgacggccgc
tcggtctgggtccagtggtggtcgcgccccgatcccggcggcaagttcacccgcaccatg
ttcattgacgtcaccgagcgggtactgatggagcaggagaaggcgcggctccagcagcag
aaccgctacctgcaagaggagatcaaagcggcccacaacttcgacgagatcgtcggccgc
agcccggcgctcgtgtcggtgctccagcgcgtgtcgaaggtggcggggaccgattcgacg
gtgctaattaccggcgaaaccggcaccggcaaggagctggtggcacgggcgatccactcc
gccagcccgcggaagggtaagccgctcatcaaactgaactgcgccgcgctgcccgcgggc
cttgtcgagagcgagctgttcgggcacgagaagggcgccttcaccggcgccaccgcgcgc
aaagcggggcggttcgaactggccgacggcggcacgctgttcctcgacgaggtgggcgag
ttgcccctggaaacgcaggcgaagctgctccgcgtgttgcaggagcgcgagttcgaccgc
gtcggcggaacggcaccggtcaaggccgacgtgcgggtgatcgccgcgaccaaccgcgac
ctcgcgaagatggcgaaggaggggaagctccgcgaggacctcttctatcgtctcaacgtg
ttcccggtccggctcccaccgctccgggagcgaacgggcgacatcccgctcctggtgcgg
ttcttcgtgaaccgcttcgccggtcggatgggcaagcggatcgagaccgtgagccgggag
acgctcgatctgctggtcgcctactcgtggccgggtaacatccgcgaactcgaaaatgtc
ttggagcgggccgtgatcctctccgacggccccgaactggaaatcgaccccgaggtgctg
ccggtcgcaggagctacagtcgattcggcttcacccgatgagagcgggcagaacctggtc
agagtcgagacggatcacatccggggcgtgttaacccaaaccggctgggtgatcgagggg
ccgaacggggccgcgaaggtgctcggcctgcacccgaacacgcttcgcagccggatgaaa
aagctcggcatctcgcggcccggccacgacgcgacatag
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