Frigoriglobus tundricola: FTUN_1112
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Entry
FTUN_1112 CDS
T06871
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
ftj
Frigoriglobus tundricola
Pathway
ftj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ftj00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FTUN_1112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ftj03021
]
FTUN_1112
Transcription machinery [BR:
ftj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FTUN_1112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
KORA
HNH_repeat
Motif
Other DBs
NCBI-ProteinID:
QJW93604
UniProt:
A0A6M5YJ68
LinkDB
All DBs
Position
complement(1235794..1236609)
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AA seq
271 aa
AA seq
DB search
MSTIPSRAPFSSYLGDIDRTPLLSASDERELAGRVLSGDVEARDRMVRANLRLVVNIARG
YAGKGLPLDDLVSEGNMGLLRAVEGFDPTMNTRFSTYASYWIKQSIKRAIINTAKTIRIP
AYMAELLTKWRRATNKLTDELGRAPTHDEIAKFLGLSKKKLTIIKKAIRVANAGSQADQG
DAGWSIEEMLMDSRAKSPDTELGETDDLKQVLQLLEKMDQREATVLRMRFGLNDEEPKTL
KEIGERLGLTRERVRQIESEALAKLNDGLAV
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacgatccccagccgcgccccgttcagctcgtacctcggcgacatcgaccgcacc
ccgctcctctccgcgtccgacgagcgcgaactggcgggccgggtgctctccggcgacgtg
gaggcccgcgaccgcatggtgcgggccaacctgcggctggtggtgaacatcgcccgcggg
tacgccggcaaggggctcccgctggacgatctcgtgtccgaggggaacatggggctcttg
cgggccgtcgaggggttcgaccccacgatgaacacgcggttcagcacctacgccagctac
tggatcaagcagagcatcaagcgggcgatcatcaacaccgcgaaaacgatccgcatcccg
gcgtacatggccgagttgctaaccaagtggcgccgcgccaccaacaagctgaccgacgaa
ctgggccgcgccccgacccacgacgagatcgccaagttcctcgggctctcgaagaagaag
ctcaccatcatcaagaaggcgatccgcgtcgccaacgccggctcgcaggccgaccagggc
gacgccggctggtcgatcgaagagatgctgatggacagccgggccaagtcccccgacacc
gaactcggcgagaccgacgacctcaagcaggtgctccagctcctcgaaaagatggaccag
cgcgaggcgaccgtgctgcggatgcggttcgggctcaacgacgaggagccgaagacgctc
aaggagatcggcgagcgcctcggcctgacccgcgagcgggtccgccagatcgagagcgag
gccctcgccaaactgaacgacggcctcgcggtctga
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