Frigoriglobus tundricola: FTUN_1999
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Entry
FTUN_1999 CDS
T06871
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
ftj
Frigoriglobus tundricola
Pathway
ftj02020
Two-component system
ftj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ftj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FTUN_1999
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FTUN_1999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ftj03021
]
FTUN_1999
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ftj02035
]
FTUN_1999
Transcription machinery [BR:
ftj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FTUN_1999
Bacterial motility proteins [BR:
ftj02035
]
Flagellar system
Flagellar assembly proteins
Stator
FTUN_1999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
KH_KRR1_1st
HTH_Mga
MarR_2
Motif
Other DBs
NCBI-ProteinID:
QJW94478
UniProt:
A0A6M5YKH9
LinkDB
All DBs
Position
2220009..2220785
Genome browser
AA seq
258 aa
AA seq
DB search
MTQTETDIHSVWVEYRERPTVELRNRLVERYLPLVKYNAERIWSRLPDGVELDDLISAGV
FGLLDAIEAFDLGRGVKFETYCVPRIRGAMLDELRTMDWVPRLVRSKASRMDAARKELEA
ALGRPPTGEELATKLGIPLDQLDQYVGDATAVNLVSLNKKWYETDSYKDVREIDILEDKK
AEDPTGRLQNRDLMKLVTRGLNRNERLIVILYYYEEMTMKEIGATLNLSESRVSQMHSSI
VARLQAHLAKRKGEFNDN
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gtgacccagaccgaaaccgacatccactccgtgtgggtcgagtaccgcgagcgcccgacg
gtcgagctgcggaaccggctcgtcgaacggtacctgccgctcgtcaagtacaacgccgag
cggatctggtcgcgcctcccggacggggtcgaactcgacgacctgatcagcgcgggggtg
ttcggcctgctcgacgccatcgaagcgttcgacctcgggcgcggcgtgaagttcgaaacg
tactgcgtgccgcgcatccgcggcgccatgctcgacgagctgcgcacgatggactgggtg
ccgcggctcgtccgcagcaaggccagccgcatggacgccgcccggaaggagctggaggcc
gcgctcggccgcccgcccaccggcgaagagctggccacgaagctcggcatcccgctcgac
cagctcgaccagtacgtgggcgacgccaccgcggtcaacctggtcagcctgaacaagaag
tggtacgagaccgacagctataaggacgtccgcgagatcgacatcctcgaggacaagaag
gccgaggacccgaccggccggttgcagaaccgcgacctcatgaagctcgtcacccgcggc
ctgaaccgcaacgagcggctcatcgtcatcctctactactacgaggagatgacgatgaag
gagatcggggcgacgctcaacctgagcgagtcgcgcgtgagccagatgcactcgagcatc
gtcgcccggttgcaggcgcacctcgccaagcgcaagggcgagttcaacgacaactga
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