Frigoriglobus tundricola: FTUN_3909
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Entry
FTUN_3909 CDS
T06871
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ftj
Frigoriglobus tundricola
Pathway
ftj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ftj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FTUN_3909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ftj03400
]
FTUN_3909
DNA repair and recombination proteins [BR:
ftj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FTUN_3909
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FTUN_3909
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_22
AAA_30
AAA_19
AAA
NPHP3_N
AAA_16
AAA_5
DUF2939
AAA_7
DUF87
Motif
Other DBs
NCBI-ProteinID:
QJW96352
UniProt:
A0A6M5YTU7
LinkDB
All DBs
Position
complement(4210803..4212887)
Genome browser
AA seq
694 aa
AA seq
DB search
MAAKFQLTTSYAPAGDQPKAIEQLTQGFASGKNIQVLLGATGTGKTFTASCVIEKLQKPT
LVLAHNKTLAAQLYKEFKGFFKNNAVHYFVSYYDYYQPEAYIPQRDIYIEKDSSINENID
RLRLAATSALVSREDVIIVASVSCIYGLGSPSDYKRMMVYVPKGEVIDRDNLLLRLIDIQ
YKRNDIAFERGTVRVRGDTIDVWPASEEFAYRIELFGDEVDALSVIHPTSGETIRPLDDL
YIYPAKHFVTPEDRVQAAIKGIEGELADRLEQFKNEGKILELERLKARCRYDLDMLREVG
YCSGIENYARWFSGRAPGEAPYTLIDFFPDDFLMVVDESHVSLPQVRGMYFGDRSRKETL
VEHGFRLPSALDNRPLKFDEFEKRMKQCLCLSATPGPYELEKTGGEVVEQVIRPTGLVDP
IIHVKPARGQVKDLEAEVRAKAAKEERTLVTVLTKRMAEDLTTYFRDAGLRCKWLHSELD
AIERIQVLRELREGQFDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRSEKSLIQTMGR
AARNVNAEVILYADTVTESMNRAMNETNRRRVIQLAYNVEHNITPTTVKTAIKNEIEDEI
EAHQLAQAAATGSTAAAEDYVTVEYVQNLYAEMLEAAKLLDFERAQALRDQIVKLEAELK
KKHGDAAPPSVLGGKGVTVSQPTGGKKKGKWKKG
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaagttccagctcaccaccagctacgcgcccgccggcgaccagcccaaggcc
atcgagcagctcacccagggcttcgccagcggcaaaaacattcaggtgctcctcggcgcc
accggcaccgggaagaccttcaccgcgagctgcgtgatcgagaagctccagaagcccacg
ctggtcctcgcccacaacaagacgctcgcggcccagctctacaaggagttcaagggcttc
ttcaagaacaacgccgtccactacttcgtcagctactacgactactaccagcccgaagcg
tacatcccgcagcgcgacatctacatcgaaaaagactcctcgatcaacgagaacatcgac
cggctccggctcgccgccacgtccgcgctcgtcagccgcgaggacgtcatcatcgtcgcc
agcgtgtcgtgcatttacggcctcggcagcccgtccgactacaagcgcatgatggtgtac
gtccccaagggggaggtcatcgaccgcgacaacctgctcctccgcctcatcgacatccag
tacaagcggaacgacatcgcgttcgagcgcggcacggtccgggtccgcggcgacaccatc
gacgtgtggcccgcgtccgaagagttcgcgtaccgcatcgagctgttcggcgacgaggtg
gacgcgctctccgtcatccacccgaccagcggcgagacgatccggccgctcgacgacctg
tacatctacccggccaagcacttcgtcacgcccgaggaccgcgtgcaggccgcaatcaag
ggcatcgagggggaactcgccgaccggctggagcagttcaagaacgagggcaagatcctc
gaactcgaacgcctcaaggcccggtgccggtacgacctcgacatgctccgcgaggtcggc
tactgctccggcatcgagaactacgcccggtggttctccggccgcgcgccgggcgaggcc
ccctacacgctcatcgacttcttccccgacgacttcctgatggtcgtggacgagtcgcac
gtcagcctgccgcaggtccgcgggatgtacttcggcgaccggagccgcaaggagaccctc
gtcgagcacgggttccggctgcccagcgccctcgacaaccggccgctcaagttcgacgag
ttcgagaagcggatgaagcagtgcctgtgcctctcggccacaccgggaccgtacgagctg
gaaaagaccggcggcgaggtggtggaacaggtgatccgcccgacggggctggtcgatccg
atcatccacgtcaagccggcccgcgggcaggtcaaggacctcgaagccgaggtgcgggcc
aaggccgcgaaggaagaacgcaccctcgtcacggtgctcacgaagcgcatggccgaggac
ctgacgacgtacttccgcgacgccggcctgcggtgcaagtggttgcactcggaactggac
gcgatcgagcgcatccaggtgctgcgcgaactccgcgagggccagttcgacgtactcgtg
ggcgtgaacctgctccgcgaagggctcgaccttcccgaagtgtcgctggtcgcgatcctc
gacgcggacaaggaggggttcctccgctccgagaagtcgctgatccagacgatgggccgc
gccgcgcggaacgtgaacgcggaggtgatcctgtacgccgacaccgtgaccgagtcgatg
aaccgggcgatgaacgagaccaaccgccggcgcgtgatccagctcgcgtacaacgtggaa
cacaacatcacgcccacgaccgtcaagacggcaatcaagaacgagatcgaggacgagatc
gaggcccaccagctcgcacaggccgcggccacgggcagcaccgcggcggccgaggactac
gttacggtcgaatacgtccagaacctgtacgccgagatgctcgaagccgcgaagctgctg
gacttcgagcgcgcccaggcgctccgcgatcagatcgtgaagctggaagcggagctgaag
aagaagcacggcgacgcggccccgccgagcgtgctgggcggcaagggcgtgaccgtgagt
cagccgaccggcggaaagaagaagggcaagtggaagaaagggtaa
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