Frigoriglobus tundricola: FTUN_3978
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Entry
FTUN_3978 CDS
T06871
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ftj
Frigoriglobus tundricola
Pathway
ftj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ftj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FTUN_3978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ftj03021
]
FTUN_3978
03400 DNA repair and recombination proteins [BR:
ftj03400
]
FTUN_3978
Enzymes [BR:
ftj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FTUN_3978
Transcription machinery [BR:
ftj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FTUN_3978
DNA repair and recombination proteins [BR:
ftj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FTUN_3978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
QJW96421
UniProt:
A0A6M5YT11
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All DBs
Position
4287826..4288833
Genome browser
AA seq
335 aa
AA seq
DB search
MRVRWRGLELPSRVQADRSTLTDTYGKFHAEPFEKGFGMTIGNSIRRILLSSLEGSAITR
VKIQGVQHEISTITGVVEDVTDIILNVKSLVVKNLSDQPKTIRIQKHEAGSIRGVDVQHD
ETIQIINPEHHIATMTSDVPFVMEMTVENGRGYRTAEDNAGKEREVGVIPVDSSFSPVVR
VKYDIEETRVGQKTNYDRLVMEIWTNGTLAPQMAIVEAAKILRKHLNPFVQYTEPGPEVP
LDEPIEIGPASSVADSANAELERKLNMSLAELDLSVRATNCLETEGITTVRELVLRSPEE
LLEVRNFGETTLREVRSKLEERGLTLGMRIPPRRS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttcgttggcgcgggctggagctgccgagccgggttcaggccgaccgttccacg
ctcaccgacacctacggtaagttccacgccgagcccttcgagaagggcttcggtatgacc
atcggcaacagcatccgccgcatcctgctgtccagcctcgagggcagcgccatcacgcgg
gtgaagatccagggcgtgcagcacgagatctccacgatcaccggcgtcgtcgaggacgtg
acggacatcatcctgaacgtcaagagcctggtggtgaagaacctgtcggaccagccgaag
acgatccgcatccagaagcacgaggccgggtcgatccggggcgtggacgtccagcacgac
gagaccatccagatcatcaaccccgagcaccacatcgccaccatgacgagcgacgtgccg
ttcgtgatggagatgacggtcgagaacggccgcgggtaccgcacggccgaagacaacgcg
ggcaaggagcgcgaggtcggcgtgatcccggtcgattcgagcttctcgccggtcgtgcgc
gtgaagtacgacatcgaggagacccgcgtcggccagaagaccaactacgaccggctggtg
atggagatctggaccaacggcaccctcgccccgcagatggcgatcgtggaggccgcgaag
atcctccgcaagcacctgaacccgttcgtccagtacacggagccggggccggaggtgccg
ctggacgagccgatcgagatcgggccggcgtcgtcggtcgcggacagcgcgaacgccgaa
ctggaacgcaagctgaacatgagcctcgccgaactcgacctgtcggtgcgggcgaccaac
tgtttggaaaccgagggcatcaccaccgtgcgcgaactggtgctccggtcgccggaggag
ctgctcgaggtccgcaacttcggcgagaccacgctccgcgaggtccggtcgaagctcgaa
gaacgcggcctgacgctggggatgcggatccccccgcgccggtcgtag
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