Frigoriglobus tundricola: FTUN_4321
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Entry
FTUN_4321 CDS
T06871
Name
(GenBank) DNA-directed RNA polymerase alpha subunit domain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ftj
Frigoriglobus tundricola
Pathway
ftj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ftj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FTUN_4321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ftj03021
]
FTUN_4321
03400 DNA repair and recombination proteins [BR:
ftj03400
]
FTUN_4321
Enzymes [BR:
ftj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FTUN_4321
Transcription machinery [BR:
ftj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FTUN_4321
DNA repair and recombination proteins [BR:
ftj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FTUN_4321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
TPR_2
TPR_8
TPR_1
TPR_14
TPR_6
TPR_16
TPR_19
TPR_17
TPR_7
TPR_9
TPR_12
ANAPC3
TPR_CcmH_CycH
TPR_Slam
TPR_11
ARM_TT21_C
TPR-S
TPR_5
Wzy_C_2
IMS_HHH_1
Motif
Other DBs
NCBI-ProteinID:
QJW96762
UniProt:
A0A6M5YV34
LinkDB
All DBs
Position
complement(4665554..4666936)
Genome browser
AA seq
460 aa
AA seq
DB search
MTESLIDLRALLVEREDFEGGMVNRLREGLSQGGPQVRNLKDIIDTLTKRLAAAAAPQQK
KIHLKLGIANYFLGHVRNAVEQLKQAEGPLAAFFLGQAHVALGQARPYAEGEAAADTTDH
YDAAVKAFDKAEKAGYAPQSVQLQRAGVLRLQGHLGEAKTILTKLKDAAAHNAEYYYQEG
ALAEAEGDLPRAAKYYERAVELEPRHAAALFRLGFLNDQQGNDHDAIGFYERCLKYPPVG
KGVLYNLGVLYEDNDMYDKAADCFRRLAKADPRDERAKLFVRDAEASLSMHYDPQDEQQN
VAFRQVMEIPITDFELSVRSRNCLKRMNIRTLGDLTRVTESQLLASKNFGETSLEEIRAI
MNAKQLRIGQSLEQGQQYEFRYRPQQNLSPEEQATLNKPVSDLNLSVRARKCMNRLNIGT
LGELVQRTADELLEAKNFGMTSLNEVRERLTQFNLKLRGD
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgacggaatctctcatcgacctgcgtgccctcctcgtcgagcgcgaggactttgaaggc
ggcatggtgaaccggctccgcgaggggctgtcccagggcgggccgcaggttcgcaacctc
aaggacatcatcgacacgctcactaagcggctcgccgccgccgccgcgccgcagcagaag
aagatccacctcaagctcgggatcgcgaactacttcctcggtcacgtccgcaacgcggtg
gagcaactgaaacaggccgaagggccgctggccgcgttcttcctcggtcaggcccacgtc
gcgctcggtcaggcccgcccctacgccgagggcgaggccgcggccgacaccaccgaccac
tacgacgccgccgtcaaggcgttcgacaaggccgaaaaggccggctacgccccgcagtcg
gtccagctccagcgcgccggcgtgctgcgcctccaggggcacctcggcgaagcgaagacg
atcctcacgaagctcaaggacgcggcggcccacaacgccgagtactactaccaggaaggc
gcgctcgccgaagccgagggcgacctgccccgcgccgcgaagtactacgaacgggccgtc
gaactcgaaccgcgccacgccgcggccctgttccgcctcgggttcctcaacgaccagcag
ggcaacgaccacgacgccatcggcttctacgagcggtgcctcaagtacccgcccgtcggc
aagggcgtgctgtacaacctcggcgtgctctacgaagacaacgacatgtacgacaaggcc
gccgactgcttccggcggctggccaaggccgacccgcgcgacgagcgggccaagctgttc
gtgcgcgacgccgaggcgtcgctctcgatgcactacgacccgcaggacgaacagcagaac
gtcgcgttccggcaggtgatggagatccccattaccgacttcgagctgtcggtccgcagc
cgcaactgcctcaagcggatgaacatccgcaccctcggcgacctcacccgcgtcaccgag
tcgcaactgctggcgagcaagaacttcggcgaaacttcgctcgaagaaatacgagccatc
atgaacgcgaagcagttgcgcatcggccagtcgctcgaacaggggcagcagtacgagttc
cgctaccgcccgcagcagaacctcagcccggaggagcaggccacgttgaacaagccggtg
agcgacctgaacctgtcggtccgcgcccgcaagtgcatgaaccggctgaacatcggcacc
ctcggcgaactcgttcagcgcaccgccgacgaactgctcgaggccaagaacttcggtatg
acctcgctcaacgaggtccgcgaacggctcacgcagttcaacctcaagctccgcggggac
tga
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