Frigoriglobus tundricola: FTUN_4438
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Entry
FTUN_4438 CDS
T06871
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ftj
Frigoriglobus tundricola
Pathway
ftj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ftj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FTUN_4438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ftj03019
]
FTUN_4438
Enzymes [BR:
ftj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FTUN_4438
Messenger RNA biogenesis [BR:
ftj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FTUN_4438
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_19
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QJW96878
UniProt:
A0A6M5YS98
LinkDB
All DBs
Position
complement(4791112..4792611)
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AA seq
499 aa
AA seq
DB search
MPFKTLGLHPSLVRATQDLGYTEPTPVQAGAIPPALTGRDVIATAQTGTGKTAGFLLPVL
HRLIDQPRGAVRALVVSPTRELAEQIDDVCRGLAKHTRVQSALVVGGRPIGAQERALRAG
ADIVIATPGRLLDHIQRGTARLDKATTLVLDEADSMFDMGFLPDVRRIIARMPARSHTLF
FSATMPPVIAKLAHELLRDPATVQIGRRSSTAVGITQAAYPVPTHLKTALLRHMLGETEM
PSVLVFTRTKHNAKKLARVLTADGFSVAELHSNRTPPQRAKAMEGFRRGDFQIMVATNIA
ARGLDVDHITHVISTDVPDVPEDYVHRIGRTGRAGATGDAFILVAREEEGALARIERQVG
QRLPRITLPDFDYTAAAPPKPPGGADKNRGGGRAPRAGPGARAGAGEAGTRRPAGAAERR
PPRTKRGRSAVVMKGSYGTLGYSFRPVVPCRSGHRRYPIRWLARSLRPRLLPVVTRGYHT
GSWPERVEPSGAFQVRQSP
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgccgttcaagacgctgggccttcacccctcgctcgtccgcgccacgcaagacctcggg
tacacggagccgaccccggtccaggccggggccatcccgcccgcgctgaccgggcgcgac
gtgatcgccaccgcccagaccggcacgggtaaaaccgccgggttcctgctgccggtgctg
caccgcctgatcgaccagccccgcggggccgtccgcgcgctcgtcgtgtcccccacgcgc
gaactggcggagcagatcgacgacgtgtgccgcgggctggcgaagcacacccgcgtgcag
tccgcgctcgtcgtgggcgggcggccgatcggcgcgcaggaacgggcactgcgggccggc
gccgacatcgtcatcgccacgcccggccggctcctcgaccacatccagcgcggcaccgcc
cggctcgacaaggcgacgacgctcgtcctcgacgaagcggacagcatgttcgacatgggc
ttcctgccggacgtgcgccggatcatcgcccgcatgccggcccgcagtcacacgctgttc
ttctccgcgacgatgccgccggtgatcgcgaagctggcccacgaactcctgcgcgacccc
gcgacggtccagatcggccgccgcagctccaccgccgtgggcatcacgcaggccgcgtac
ccggtgccgacgcacctcaaaaccgccctgttgcggcacatgctgggcgagaccgagatg
ccctcggtgctggtgttcacgcgcacgaagcacaacgcgaagaagctggcccgcgttttg
accgcggacgggttcagcgtggcggagctgcacagcaaccggaccccgccgcagcgggcg
aaggcgatggaggggttccgccgcggcgacttccagatcatggtggcgacgaacatcgcc
gcccgcgggctggacgtcgaccacatcacgcacgtcatcagcacggacgtgccggacgtg
ccggaggactacgttcaccggatcggccgcacgggccgggccggcgcgaccggcgacgcc
ttcatcctggtggcgcgcgaggaagagggcgcgctggcccggatcgagcggcaggtgggg
cagcggctcccgcggatcacgctcccggacttcgattacacggccgcggccccgcccaaa
ccgccgggcggcgcggacaagaaccgcggcggcgggcgcgccccgcgcgccgggccaggg
gcgcgcgcaggggccggcgaagccggcacgcggcggcccgccggggccgcggagcggcga
ccgccgcggaccaagcgggggcggtcggcggtcgtgatgaaggggagctacggcacgctc
gggtattcgttccgtccggtcgtcccctgccgaagtgggcaccgccggtatccgatacgg
tggctggcccgctcccttcggccgcggctccttcccgtcgtgacgcgcgggtaccacacc
ggttcgtggccggagcgagttgagccgtcgggcgcgttccaggtaagacagagcccatga
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