Frigoriglobus tundricola: FTUN_5743
Help
Entry
FTUN_5743 CDS
T06871
Name
(GenBank) RecD-like DNA helicase YrrC
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ftj
Frigoriglobus tundricola
Pathway
ftj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ftj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FTUN_5743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ftj03400
]
FTUN_5743
Enzymes [BR:
ftj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FTUN_5743
DNA repair and recombination proteins [BR:
ftj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FTUN_5743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
Helicase_RecD
PIF1
DEAD
AAA_22
nSTAND3
AAA_28
AAA_16
UvrD-helicase
HHH_3
NTPase_1
AAA
AAA_5
PhoH
SLFN-g3_helicase
NPHP3_N
bpMoxR
AAA_29
MeaB
T2SSE
TsaE
ATPase_2
MoCF_biosynth
HerA_C
KTI12
AAA_14
ABC_tran
TrwB_AAD_bind
Thymidylate_kin
FtsK_SpoIIIE
Mg_chelatase
DUF815
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
QJW98163
UniProt:
A0A6M5YY73
LinkDB
All DBs
Position
complement(6203781..6206018)
Genome browser
AA seq
745 aa
AA seq
DB search
MPEQITGVIERITFHNEDNGYCVLRVAARGHRDVVTVVGHCQQVIAGEYVTATGEWVTDR
AHGSQFKAAELKTNPPHTAEGIAKYLGSGLVKGIGPKFAQRIVEVFGDKTLEVIDKSPTF
LAQVKGLGPKKIEKIRTSWEEQRESRKIMVFLQSHGIGTARAVRIYKTYGDRAIELIKAN
PYRLSADIWGVGFDTADKLAVALGIPHNSPFRAQAAVRHVLQEESGNGHVGYPEELLRTR
TTEMTGIEPNGIIDAIEQLRITDEVVRDSAQSAERGTRNAEFKKRENTEGLTPALDDLIF
LKPLFLAELGVARAVKALGAGPHPLPNVNLDAAIKWAETRMGIGFAASQRAAIRAAVTNK
LVVVTGGPGTGKTTIVRAIIEMFLAKSLRVLLTAPTGRAAKRLAESTGREAKTIHRLLEF
DPRNRQFARCAESPLDVDLLVVDETSMVDVVLMNKLLQAVPPWACVVLVGDVDQLPSVGA
GAVLTDLIDSKALAVARLTEVHRQAESSWIVRAAHAINHGEEPQSAPPGGDGDFYFVEAN
DPDAVIQRVVQMVRDRIPAKFKLDPFRDVQVLSPQVKTTLGVANLNRELQAALNPARPGV
AEVKRYDSAFRTGDKVMQVQNNYDREVFNGDIGRITEIDGDDQMLLVDFDGRLVEYEFSD
LDELQLAYCCSIHKSQGSEYPAVVIPVHTQHFVMLQRNLLYTGITRGRKLVALVGSRKAL
WIAAKTADTKMRYSLLKWRLKPADE
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaacagatcacgggcgtgatcgagcggatcacgttccacaacgaggacaacggg
tactgcgtgctccgggtggcggcgcgcgggcaccgcgacgtcgtcaccgtcgtcgggcac
tgccagcaggtgatcgcgggcgagtacgtcactgccacgggcgagtgggtgaccgaccgc
gcgcacgggtcgcagttcaaggcggccgagctgaaaacgaacccgccgcacacggccgag
gggatcgccaagtacctcggctccgggctggtcaagggcatcggcccgaagttcgcgcag
cggatcgtcgaagtgttcggcgacaaaacacttgaagtgatcgacaagtcgcccacgttt
ctggcgcaggtgaaggggctcggcccgaagaagatcgagaagatccgcacgagctgggag
gaacagcgcgagtcccggaagatcatggtgttcctccagtcgcacgggatcggcaccgcc
cgcgcggtgcgcatctacaagacctacggcgaccgcgccatcgaactcatcaaggcgaac
ccgtaccggctgagcgcggacatctggggggtcgggttcgacaccgccgacaagctcgcg
gtggccctgggcatcccgcacaactcgccgttccgcgcgcaggccgcggtgcggcacgtg
ctccaggaggagtcgggcaacgggcacgtcggctacccggaagagctgctccgcacgcgc
accaccgagatgaccggcatcgagcccaacggcatcatcgacgcgatcgagcaactgcgc
atcaccgacgaggtggtgcgggacagtgctcaaagcgcggagcgcggaacgcggaacgcg
gagttcaagaagcgagagaacacagaaggtttgacccccgcgctcgacgacctgatcttc
ctcaagccgctgttcctcgcggaactcggcgtcgcgcgggcggtgaaggcgctgggggcc
gggccgcacccgctgccgaacgtgaacctcgacgccgcgatcaagtgggccgagacgagg
atgggcatcgggttcgcggccagccagcgggccgcgatccgcgccgcggtcaccaacaag
ctggtcgtcgtcaccggcggccccggcacgggcaagaccaccatcgtccgcgccattatc
gaaatgttcctggcgaagtcgctccgcgtgctgctcaccgcgcccaccggccgcgcggcg
aagcgcctggcggaatcgaccgggcgcgaggcgaagacgatccaccgcctgctggagttc
gacccgcggaaccgccagttcgcgcgctgcgccgagagcccgctcgacgtggacctgctc
gtcgtggacgagacctcgatggtcgacgtggtgctgatgaacaagctgctccaggccgtg
ccgccgtgggcgtgcgtggtgctggtgggcgacgtcgaccagttgccctcggtcggcgcg
ggcgcggtgctcacggacctcatcgattcgaaggccctcgcggtcgcccggctcaccgag
gtccaccggcaggccgagagcagttggatcgtgcgcgcggcccacgccatcaaccacggc
gaggagccgcagtccgccccgcccggcggcgacggcgacttctacttcgtggaggcgaac
gacccggacgccgtgatccagcgcgtcgtccagatggtccgcgaccgcatcccggcgaag
ttcaagctcgacccgttccgcgacgtgcaggtgctctccccgcaggtgaagacgacgctc
ggcgtggcgaacctgaaccgcgagctgcaagcggcactgaaccccgcacggcccggcgtg
gcggaggtgaagcggtacgattcggcgttccgcaccggcgacaaggtgatgcaggtccag
aacaattacgaccgcgaggtgttcaacggcgacatcggccgcatcaccgaaatcgacggc
gacgaccagatgctcctggtggacttcgacgggcgcctggtggaatacgaattcagcgac
ctcgacgagttacaactggcgtactgttgttccattcacaaaagtcagggctccgagtac
ccggcggtcgtgatcccggttcacacgcagcacttcgtaatgctccagcgcaacttgctg
tacacaggtatcacgcgcgggcggaagctggtggcgctggtgggcagccgcaaggcgctc
tggatcgcggccaagaccgccgacacgaagatgcgctattcgctcctaaaatggcggttg
aagccggccgatgagtga
DBGET
integrated database retrieval system
