Frigoriglobus tundricola: FTUN_5963
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Entry
FTUN_5963 CDS
T06871
Name
(GenBank) Uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ftj
Frigoriglobus tundricola
Pathway
ftj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ftj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FTUN_5963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ftj03400
]
FTUN_5963
Enzymes [BR:
ftj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FTUN_5963
DNA repair and recombination proteins [BR:
ftj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FTUN_5963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
QJW98373
UniProt:
A0A6M5YYR9
LinkDB
All DBs
Position
complement(6463908..6465254)
Genome browser
AA seq
448 aa
AA seq
DB search
MIVAAPDFSAWRGAARALLAAEVSPADVLFDDGTATGLFAADELPPVPARTAFEVPRAFV
ALAESVACHRAPQRWDRLYRALWRLTRGEPHLLDLATDDDVRWLLRAEKSVRRDVHKMHA
FVRFCKVDEHFVAWHRPDHRIVRRAAPFFRRRFPEMHWSILTPDESVTWNGEELHFGPGV
RAKDAPPPDVLEVMWKTYYRATFNPARIKLKAMKKELPVRHWPTLPETALIPDLLAEASD
RVSAMVRHSEGTRSAADFLPAARDLDSLRAAARDCTACGLCGPGTPVAFGTGPTDARIVL
VGDQPDTSGAADELLAAALEEAGIDRAAVYRTTAVKQTAFVKRDGVRDPRRASSREAGAC
RPWLLAELAALRPAVIVCLGPLAAQAVLGPLFRFAEHRGDVFQTDGALTVATHHPATALR
VPADARAEVRAELIIHLARALELAGTGH
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgatcgttgccgcacccgacttcagcgcgtggcgcggcgccgcccgcgcgctgctcgcg
gccgaggtgtcgccggccgacgtcctcttcgacgacggtaccgcgaccggcctgttcgcc
gcggacgagctcccgcccgtacccgcccggaccgcgttcgaggtgccgcgggcgttcgtc
gcgctcgcggaatcggtggcctgtcaccgcgccccgcagcggtgggaccggctgtaccgc
gcgctgtggcggctgacccgcggcgaaccgcacctgctcgacctcgccaccgacgacgac
gtgaggtggctgctgcgtgcggagaagtcggttcggcgcgacgttcacaagatgcacgcc
ttcgttcgcttctgtaaggtcgatgagcactttgtcgcgtggcaccggccggaccaccgc
atcgtgcgccgggccgcgccgttcttccggcggcgcttccccgaaatgcactggtcgatt
ctcacgccggacgagtcggtgacgtggaacggcgaggagctgcacttcggacccggcgtg
cgggcgaaggacgcgcctccgccggacgtgctcgaagtcatgtggaagacctactaccgg
gcgacgttcaacccggcgcggatcaagctcaaggcgatgaagaaggagctgccggtgcgg
cactggccgacgctgccggagacggcgctcattcccgacctgctggcggaagcctccgac
cgcgtgtccgcgatggtgcgacacagcgaaggaacacgatcggccgccgacttcctgccc
gccgcgcgtgacctcgacagcctccgggccgccgcccgtgactgcaccgcctgcgggctg
tgcggaccgggcacgccggtcgcatttgggaccggcccgaccgatgcgcggatcgttttg
gtcggcgatcagccggacacgagcggtgccgcggacgagctgctcgccgccgcgctggag
gaagcgggcatcgaccgggccgctgtgtaccggacgaccgccgtgaagcagaccgcgttt
gtgaagcgggacggcgtccgcgatccgcgccgggccagttcgcgcgaggcgggcgcgtgc
cggccgtggctgctcgcggaactggccgcgcttcgaccggccgtcatcgtgtgtctcggc
cccctggccgcgcaggcggtattggggccgctctttcgcttcgccgagcaccgcggggac
gtgtttcaaaccgacggcgcactcaccgtcgcgacacaccacccggcaacggccctccgc
gttccggcggatgcgcgggcggaggtcagagcggaactgatcatccacctcgcgcgagca
ctggaactcgccgggaccggccactaa
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