Frigoriglobus tundricola: FTUN_8903
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Entry
FTUN_8903 CDS
T06871
Name
(GenBank) 3'-to-5' exoribonuclease RNase R
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ftj
Frigoriglobus tundricola
Brite
KEGG Orthology (KO) [BR:
ftj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ftj03016
]
FTUN_8903
Enzymes [BR:
ftj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
FTUN_8903
Transfer RNA biogenesis [BR:
ftj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FTUN_8903
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GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
DUF6907
Motif
Other DBs
NCBI-ProteinID:
QJX01263
UniProt:
A0A6M5Z7Q0
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All DBs
Position
complement(9735152..9736666)
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AA seq
504 aa
AA seq
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MKEQTGPSDLRAIARRAMRERGLEPDFPPDAIGQLNGIPGAAHETDPAIRDLRALLWCSI
DNDTSRDLDQLTVADPLPAGRVKLLVAIADVDALIKPASPLDRHAGVNTTSVYTAAQTFP
MLPERLSTNLTSLNENADRLALVLELVVAGDGSPEGFAVYRAVVNNRAQLAYSSVAAWLD
GRAPVPEKIARTDGLAEQLRLQDRIAQAMRSVRGSHGALDLETIEPEAVVEDGRVVDLRL
ERQNRAQDMIAAFMIAANGASAQFLQKRGAPALRRVVRTPKRWDRIREVAAGFAEPLPAV
PDSKALAAFLARRRQRDPMRFPDLSLTVIKLLGAGEYVVQLPGHEPAGHFGLAVREYSHS
TAPNRRFPDLITQRLLKATLAGAQLPYDPAELAALATHCTAQEDAARKVERQVRKSAAAL
FLSGHIGDVFDALVTGAADKGTWVRVLDPPVEGRLTAGYHGVDVGDEIRVELTGLNVERG
FIDFARSSSEGTPSATLKRAPGGP
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagcagaccggcccgagcgatctccgtgcgatcgcccgccgggccatgcgggag
cggggactcgaacccgacttccctccggatgcgatcggccaactgaacggcatcccgggc
gcggcgcacgaaacggacccggcgattcgggacctccgcgccctcctctggtgctcgatc
gacaacgatacgtcgcgcgacctcgaccagctcacggtggcggacccgctcccggcgggc
cgggtcaaactcctggtcgccatcgcggacgtcgatgcgctcatcaagccggcttcgccg
ctcgaccgccacgccggggtcaacacgacctccgtgtacacggccgcgcagaccttcccc
atgctgccggaacggctctcgacgaacctgacgtctctgaacgagaacgcggaccggctc
gccctcgtcctcgaactggtggtggcgggtgacggctcccccgagggcttcgcggtgtac
cgcgccgtcgtcaacaaccgcgcccaactggcctactcgagcgtcgcggcgtggttggac
gggcgcgcgccggtgcccgaaaagatcgcgcggaccgacggcctggcggagcaactgcgg
cttcaggaccggatcgcccaggcgatgaggtcggttcgcggctcacacggtgcgctggac
ctcgaaacgatcgagcccgaggcggtggtggaggacggtcgggtcgtcgatctgcgtttg
gaacggcagaaccgggcgcaggacatgatcgccgctttcatgatcgcggccaacggggcg
tccgctcagttcctgcagaagcgcggcgcgccggcgctgcggcgcgtcgttcgcaccccc
aagcggtgggaccgcattcgtgaagtggccgcggggttcgccgagccgctcccggcggtt
cccgattccaaggctctggccgcttttctggcgcggcgccggcaacgggacccgatgcgg
ttcccggacctgtcgctaacggtcatcaaattgctgggggccggcgagtacgtcgttcaa
ctccccgggcacgagccggcggggcacttcgggttggccgtgcgggaatacagccattcc
accgcaccgaaccgccgcttccccgacctcatcacccagaggctgctgaaagcgaccctg
gcgggtgcccaactcccctatgacccggccgaactcgccgcactggcgacgcactgcacc
gcacaagaagacgcggcccggaaagtagagcgacaagtccgaaaatccgccgctgcgctg
ttcctgtccgggcacatcggggacgtcttcgatgccctggtcaccggtgccgccgacaaa
gggacctgggttcgggtgctggatccccctgtcgagggccggctgacggccgggtaccac
ggagtcgatgtgggcgacgaaatccgggtcgagctcaccggtctgaatgtcgagcgcggc
ttcattgatttcgcgcgctcgagtagtgaagggacgccgagcgcgaccctgaagagggct
cccggtggaccctga
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