Faecalibacterium taiwanense: PXT33_000205
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Entry
PXT33_000205 CDS
T10210
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ftk Faecalibacterium taiwanense
Pathway
ftk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ftk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PXT33_000205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ftk03019
]
PXT33_000205
Enzymes [BR:
ftk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PXT33_000205
Messenger RNA biogenesis [BR:
ftk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PXT33_000205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
XBA10367
LinkDB
All DBs
Position
complement(43539..45455)
Genome browser
AA seq
638 aa
AA seq
DB search
MTFKELNLSAPLLRAVQEAGYETPSPIQAAAIPPVLSGRDLMGCAQTGTGKTAAFALPML
DRLTANAPRRKGAIRALILTPTRELALQIGESFDAYGKYLKLRSTVIFGGVGQAPQVEAL
KKGVDILIACPGRLNDLIGQGFIDLSNLEIFVLDEADRMLDMGFVHDVKKVIAKLPGERQ
NLMFSATMPTEIEQLAAGILRKPAFVKVDPVSSTVDRIQQSLYHVEKGNKKFLLPWLIKN
LQPPVVNALVFSRTKHGADKIAKDLTKQGIPAAAIHGNKSQTARVTALENFKAGKTKVLV
ATDIAARGIDISELSHVFNYDLPEVPETYVHRIGRTARAGADGTAVSFCAPEEQEYLAGI
EKLNRRKIPVVSGHPWDGVPAPVRPEPPVRGKKPKAAAAEPAEKPAAKQLKPAKAEAKNA
KPEKKAAPAPKVQAKPAKTEKEEPLMDDTKRTTGGRSNDRRSNNNSRPRREQNAPARGSN
AQPKFDPHFVSAPEATPLRPAKKTPAAPAAPAIRTAAQPAQQNSSTQGQKSRRNDRSDRP
ARQNSQPAAQSQSAEQGRGANNGQRGRQNASRNAQPAPARAPRAESSRRGRAAAARDEDP
GLMLISRRPPQQKFTNFEEYMNAHGGATAPIEDHSDEV
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgacatttaaagaattgaatctgtccgccccgcttctgcgcgctgtgcaggaggcaggc
tatgagaccccgtcgcccattcaggcggcggcgatcccgccggtgctgtccggccgggat
ctgatgggctgcgcccagaccggtaccggcaagacggctgcttttgcgctgcccatgctg
gaccggctcacggccaatgcgccccgcagaaagggtgccatccgcgccctgatcctgacc
cctacccgtgagcttgctttgcagatcggcgaaagctttgatgcctacggcaagtatctc
aagctgcgcagcaccgtcatttttggcggcgtgggccaggcaccgcaggtggaagcgctg
aaaaagggcgtggacatcctgatcgcctgcccgggacggctcaacgacctgatcggtcag
ggatttatcgatctctcgaaccttgagatctttgtgctggacgaagccgaccggatgctg
gatatgggctttgtgcacgatgtgaagaaggtgatcgcaaagctgcccggggagcgtcag
aacctgatgttcagcgccaccatgcccaccgagatcgaacagctggccgcaggcatcctg
cgcaagcccgccttcgtcaaggtggacccggtgtccagcaccgtggaccgcatccagcag
agcctgtaccatgtggaaaagggcaacaagaaattcctgctgccgtggctcatcaagaac
ctgcagcccccggtggtgaacgcgctggtgttcagccgcaccaagcacggcgcggataaa
attgcaaaagacctcaccaagcagggcatcccggcggcggccatccatggcaacaagagc
cagaccgcccgcgtgaccgcgctggaaaacttcaaggccggtaagaccaaggtgctggta
gccaccgatatcgccgcccgcggcatcgatatcagcgagctgtcccatgtgttcaactac
gacctgcccgaggtaccggagacttacgtgcaccgcatcggccgcacggcccgcgccggt
gccgacggtacggcggtcagcttctgtgcacctgaggagcaggagtatctggcaggcatc
gaaaagctgaaccgccgcaaaattcccgtggtgagcggccacccgtgggacggcgtgccc
gcgccggtgcgcccggagccgccggtgcgcggcaaaaagcccaaggcagccgccgctgaa
ccggcagaaaagcctgccgcaaagcagctgaagcccgcaaaggccgaagcaaaaaacgca
aaacctgaaaaaaaggctgcacccgcacccaaggtgcaggcaaagcccgcaaaaaccgaa
aaagaggaaccactcatggatgataccaagcgtactaccggcggacgcagcaatgaccgc
cgttccaataataacagccgcccgcgccgggagcagaacgctcctgcccgcggcagcaat
gcgcagcccaagtttgacccgcattttgtgagtgccccggaggccactccgctgcgcccg
gccaaaaagactccggctgcacccgccgccccggccatccgtacggctgcacagcctgct
cagcagaatagcagcacgcaaggccagaagagccgtcgcaatgaccgcagcgaccgtccg
gcccgccagaacagccagcctgccgcccagagccagagcgcagagcagggccgcggtgca
aacaacggccagcgcggccgtcagaatgcgtcccgcaatgcacagcctgcaccggcccgt
gcccccagagcggagagcagccgccgcggccgtgccgctgctgcaagggacgaagacccg
ggccttatgctcatcagccgccgtccgccgcagcagaagttcacgaactttgaggagtat
atgaacgcccacggcggtgcaactgcacccattgaggaccacagcgacgaagtatga
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