Faecalibacterium taiwanense: PXT33_002945
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Entry
PXT33_002945 CDS
T10210
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ftk Faecalibacterium taiwanense
Pathway
ftk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ftk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PXT33_002945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ftk03019
]
PXT33_002945
03009 Ribosome biogenesis [BR:
ftk03009
]
PXT33_002945
Enzymes [BR:
ftk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PXT33_002945
Messenger RNA biogenesis [BR:
ftk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PXT33_002945
Ribosome biogenesis [BR:
ftk03009
]
Prokaryotic type
rRNA helicases
PXT33_002945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_30
Cas3-like_C_2
PhoH
Helicase_RecD
Utp25_C
PGBA_N
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XBA10865
LinkDB
All DBs
Position
630926..632113
Genome browser
AA seq
395 aa
AA seq
DB search
MLYSELQCSDAIHKAVERMGFAEMTEIQEKTIPVMMAGYDVIAKAPTGTGKTCAFGIPVA
EHILPENKYPQAVIMAPTRELAQQIAQELEELTYFMPEVQVACVYGGANMEKQAKRLAEG
CQIVVATPGRLMDHYKHHSIDISHVTQIVLDEADEMLNMGFYKDVRHIIEMMKARKSLSM
FSATISREVMDIGWLYQHNAEEITVQPREESQPKITQYMLETSGRNKLSDLAQIIIGENY
KRVMVFCDTKFNTATLANQLARLGFSVDCLHGDLSQKERNQIMQNFRDGKLAILVATDVA
ARGIDVSDVDAVINYDVPSENEHYTHRIGRTGRAKKEGVSYLFYVPEEKKRVQELLRLTR
NTDLCTPVHFDFNHEHIVVEKKQDSADRFQIKCYF
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgctttacagtgagttgcagtgcagcgatgccatccacaaggccgtggagcgcatgggc
tttgccgaaatgaccgaaattcaggaaaagaccatccccgtcatgatggcgggctatgac
gtgatcgcaaaagcccccaccggcaccggcaagacctgtgccttcggcatcccggtggcg
gagcatatcttaccggaaaacaagtacccgcaggccgtgatcatggcccccacccgggag
ctggcccagcagatcgcgcaggagctggaagagctgacctatttcatgcccgaagtgcag
gtggcctgcgtgtacggcggtgccaacatggaaaagcaggcaaagcgccttgccgagggc
tgccagatcgtggtggcaacgccgggccgtctgatggaccactacaagcaccattccatt
gatatctcccatgtgacccagatcgtgctggacgaggccgacgaaatgctgaacatgggc
ttctataaggatgtgcggcatatcattgaaatgatgaaggcccgcaagtccctttccatg
ttctcggccaccatcagccgcgaggtaatggacatcggctggctgtaccagcacaacgct
gaggagatcactgtccagccccgtgaggagagccagcccaagatcacccagtacatgctg
gagacctccggccgcaacaagctttccgaccttgcacagatcatcattggtgagaactac
aagcgtgtgatggtgttctgcgataccaagttcaacactgccactctggccaatcagctg
gcacggctgggcttctcggtggactgcctgcacggcgacctctcccagaaggagcgcaac
cagatcatgcagaacttccgggacggcaagctggccattctggtagccaccgacgttgcc
gcccgcggcatcgatgtttcggatgtggatgccgtgatcaactacgatgtgcccagtgag
aacgaacattacacccaccgcatcggccgcaccggccgtgccaaaaaggagggcgtgagc
tacctgttctatgtgccggaggagaaaaagcgggtgcaggaactgctgcgcctgacccgc
aataccgacctgtgcaccccggtgcacttcgacttcaaccatgagcacattgtggtggag
aaaaagcaggacagcgccgaccggttccagatcaagtgctacttctga
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