Francisella tularensis subsp. mediasiatica FSC147: FTM_1425
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Entry
FTM_1425 CDS
T00698
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ftm
Francisella tularensis subsp. mediasiatica FSC147
Pathway
ftm03410
Base excision repair
ftm03430
Mismatch repair
ftm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ftm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FTM_1425 (recJ)
03430 Mismatch repair
FTM_1425 (recJ)
03440 Homologous recombination
FTM_1425 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ftm03400
]
FTM_1425 (recJ)
DNA repair and recombination proteins [BR:
ftm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FTM_1425 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FTM_1425 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FTM_1425 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ACD31256
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Position
1534054..1535796
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AA seq
580 aa
AA seq
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MLIKQKKIDNNIFSTLLAKGYDSFTAKIISARVRKIENLELILNGSIKDLSSPFLFKDIE
KAVERLYQALQNNEIIGLETDHDCDGQTSHAILYEALTKIFGHPKEKIRSYIGHRLQEGY
GLSESLMNRILTDKIRPSLIITADNGSTDEPRIAILKKNGIDTIITDHHAIPPEGTPKSA
IAVLNPTQQGCNYPDKAIAGCMVAWLFMAALRRKYLQNNKMISQSYGLSNLLDFVAIGTV
ADCVSMATSHNNRIVTKFGIEQLKNNQRLCWDFVDKDKLSSEYIGFSIAPILNSDGRVSD
ALGSVSFLLEEDEHKIEDIFDNLKQQNNQRKEIQKKLTQEAIVQSYQLNQQKNSLCILLE
DGHSGIHGISASRIKEMFGKAVIIFSQTQHDSTLISGSARSIDNIHIKTILDNIAVKEPQ
LIIKYGGHKGAAGLTIKKSDFDKFYQLFESEITDIITKQNIILEPIIEYDFELDEHHFEL
ETLDKIDALEPFGRKFEKPLFCNQFMLENLRLVGKDKNHAQLVLRYKNISSIKAIWFNAT
DNKILEQLIIGDCIKACYELQKEEFLGQINLSLNIKTIEK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgctaatcaaacaaaaaaaaattgataacaatatctttagtactctactagctaaaggc
tatgattcttttacagcaaaaataatctctgctagagtacgtaaaatagaaaaccttgag
ctgattttaaatggttcaatcaaggatctgtcatcaccatttttattcaaagatattgaa
aaagctgtagaaagactttatcaagcattacaaaataatgaaattattggattagaaact
gatcatgactgtgacggtcagacttcacacgcgattttgtatgaagctttaactaaaata
tttggtcaccctaaagaaaaaatccgctcatatattggccatagactgcaagaaggctat
ggtttatcagagtccctaatgaatagaattcttacagataaaataaggccaagcctaata
ataacagctgataatggttctacagacgagccgaggattgcaatccttaaaaaaaatggt
attgatacaattataactgatcatcatgctatcccacctgaaggcactcctaaaagtgct
attgccgtacttaatccaactcaacaaggctgtaactatccagataaagctatcgctggc
tgtatggttgcttggctttttatggcagcactgcgcagaaagtatctgcaaaacaacaaa
atgatatcgcaatcatatggcttaagcaatctgttagattttgtcgctattggcacagtt
gctgattgcgtaagtatggcaactagtcataataatcgtattgtgacaaaatttggtatc
gagcaattaaaaaataatcaacgcttatgctgggactttgtagataaagataaactgtca
agtgaatacattggttttagtattgcgccaattctaaatagtgatggtagagtttctgat
gctttaggttctgttagctttttactagaagaagatgagcacaagatagaagatatcttt
gataatctcaaacaacaaaacaaccagcgtaaagaaatccaaaaaaaacttactcaagaa
gctatagttcaatcgtatcagctaaatcagcaaaaaaactcattatgtatccttttagag
gatggtcattctggaattcatgggatatcagcaagtagaattaaggaaatgtttggcaaa
gcagtaattatcttctcgcaaacgcagcatgattcaactctaatatctggatccgcacga
agcatagacaatattcatatcaaaactatcctagataatatagctgttaaagaaccacaa
ctaatcatcaaatatggtggccataaaggtgccgcaggtttaacgataaaaaaatctgat
tttgataaattctatcaattatttgaaagtgaaataactgacattatcactaaacaaaat
ataattctcgagcctataatagaatatgattttgagcttgatgagcatcactttgaatta
gagacgttagataaaatagatgctctagaaccctttggtagaaaatttgaaaaaccttta
ttttgtaatcaatttatgcttgaaaatttacgcttagttggcaaagataaaaatcatgct
cagctagtattacgctataaaaatatatcctcaatcaaagcaatatggtttaacgctacg
gataataaaatactagaacagctaattatcggcgactgtataaaagcctgctatgagtta
caaaaagaagaattcttaggacaaataaacctatcacttaatattaaaactatcgaaaaa
tga
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