Francisella tularensis subsp. novicida U112: FTN_1121
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Entry
FTN_1121 CDS
T00432
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ftn
Francisella tularensis subsp. novicida U112
Brite
KEGG Orthology (KO) [BR:
ftn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ftn03400
]
FTN_1121 (phrB)
Enzymes [BR:
ftn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FTN_1121 (phrB)
DNA repair and recombination proteins [BR:
ftn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FTN_1121 (phrB)
Prokaryotic type
FTN_1121 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF6996
Motif
Other DBs
NCBI-ProteinID:
ABK90007
UniProt:
A0Q6Z2
LinkDB
All DBs
Position
1184715..1186109
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AA seq
464 aa
AA seq
DB search
MSKKIAIHWFRQDLRLADNPALYQASQADETITIFILDKNQDIGSASKLWLHHSLNSLNS
SLDNKLNFYSGNPLEIIKKIIKENNITDFYWNRCYDKYSIDRDTQIKQFLQQHKINVNSF
NGSLLIEPWQCKKDDGTHYKVYTPFYKELIKIRKYRSNIAKPNFSYLRKLNNSENLDSLK
LLEPKHSWQNIIKQWQIGESASHQILEEFLNNKVKEYKTARDFMSTDSTSKLSPYLHFGE
ISPSQIFNAVQSLDYIGNNEEHFIKELVWRDFSYYQIYYYPELHNKNINQKFDSFKWDND
PTLLKKWQKGQTGIPIVDAGMRELWQTGYMHNRVRMIVASFLIKNCLIHWKYGEKWFFDT
LFDADFASNNANWQWVAGCGLDAAPYFRIFNPVLQAEKFEAYEYIRKYVPELKLLPNKLI
AKPWEASELVLQEAGITLGQNYPKPIVDLKKSRDRALQLHNQIK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaaaatagctatacattggtttcgtcaagatttacgcttagcagacaatcct
gctctatatcaggctagtcaagccgatgaaacaattacaatatttatactagataaaaat
caagatataggtagtgcaagtaaactttggctacaccattctttgaatagcttaaatagt
tctctagacaataaacttaacttttatagtggtaaccctctagaaattataaaaaaaatt
atcaaagaaaataacattacagacttctattggaatagatgttatgacaagtacagtata
gatagagatacccagattaaacagtttctgcaacaacataaaataaatgtaaatagcttt
aatggtagtttacttatagagccatggcaatgcaaaaaagatgatggtacgcactataaa
gtttacactccattttataaagagcttatcaaaataagaaaatatcgctcaaatattgct
aaaccaaattttagttatctaagaaagcttaataattctgaaaatttagactcattaaaa
ctactagaaccaaaacactcttggcaaaatataataaaacaatggcaaattggtgaaagt
gcttctcaccaaatacttgaggagtttttaaataataaagtaaaagaatacaaaacagct
agagacttcatgagcacagactcaacatctaaattatcgccataccttcatttcggtgag
atatctcctagccaaatttttaatgctgtacaaagtttagactatattggtaacaatgaa
gagcactttatcaaagagttagtttggcgtgatttttcttattatcaaatatattattat
ccagaattacataacaagaatatcaaccaaaaatttgatagttttaaatgggataatgat
cctactcttctcaagaaatggcaaaaaggacagactggcattccaatagtagatgctgga
atgagagaactttggcagactggctatatgcacaatcgcgtacggatgattgttgctagt
tttcttatcaaaaactgtcttatccattggaaatatggcgaaaaatggttttttgatacc
ttatttgatgctgactttgcgagtaataacgctaactggcaatgggtcgcaggctgtggt
ttagatgcagcaccctactttagaatttttaacccagtgttacaagctgaaaaatttgaa
gcttatgagtatatccgtaaatatgtaccagaattaaagcttttgcccaataaattaatt
gccaaaccatgggaagctagtgagctagtattacaagaagctggtatcacactaggtcag
aactatccaaaaccaatagtagatcttaaaaaatctcgtgacagagctttacaactacat
aatcaaataaagtaa
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