Francisella tularensis subsp. novicida U112: FTN_1176
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Entry
FTN_1176 CDS
T00432
Symbol
uvrB
Name
(GenBank) excinuclease ABC, subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ftn
Francisella tularensis subsp. novicida U112
Pathway
ftn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ftn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FTN_1176 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ftn03400
]
FTN_1176 (uvrB)
DNA repair and recombination proteins [BR:
ftn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FTN_1176 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FTN_1176 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
Kinesin
Microtub_bd
SWI2_SNF2
eIF3_p135
AAA_22
DUF87
PMT2_N
Motif
Other DBs
NCBI-ProteinID:
ABK90062
UniProt:
A0Q747
LinkDB
All DBs
Position
complement(1247654..1249660)
Genome browser
AA seq
668 aa
AA seq
DB search
MNKFNLVTKYAPAGDQPQAIQSLVNGINTGLQHQVLLGVTGSGKTYTMANVIQQTQKPCL
ILAHNKTLAAQLYSEFKQYFPDNAVEYFVSYYDYYQPEAYVAASDTYIEKDSSVNEHIEQ
MRLSATKAILERNDVIIVATVSAIYGLGDPEQYMQMLLHLKVGEELGLKKAQTKLVEMQY
SRNDMDFSRGSFRVRGEVLDIFPADSEKDAIRVEFFDDEIEAISVIDSLTSKKLKSLHRA
TIFPSTHYVASKERKEIVIEEIKKELKERVKYFEKEGKLLEAQRIEQRTKYDIEMIQELG
YCTGIENYSRLLSGRAPGDPPPTLIDYLPENALVIVDESHVTLPQFGGMYKGDLSRKSNL
VNYGFRLPSALDNRPLKFNEFESLLPQTIYVSATPANYELEKSQNTVQQVIRPTGLLDPE
VFVRPVAIQVEDALSEINKAIAKEERVLITTLTKKMAENLTEYLSEHGVNVRYLHSDIDT
VERVQIIHDLRHGVFDVLVGINLLREGLDMPEVGVLLIFDADKEGFLRSEKSLIQTIGRV
ARNQNGRAILYADVVTKSMQKAMDETLRRRKLQDEYNQKHNIVPKTIIKNIDDMLDSSPE
MQKCAYKNNLRLKVDDVDVSAILGMTEATKVIKALEKRMRAYAKELEFEKATTIRDKITE
IKQKFINL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaataaattcaacctagtaacaaaatatgcaccagctggcgatcagcctcaagcaata
caaagccttgttaatggtataaatactgggttacaacaccaagtattgcttggtgtgaca
ggctctggtaaaacatatactatggcaaatgtcattcaacagactcaaaaaccatgcttg
atattagcgcataataaaactctagctgcacaactgtattctgagtttaaacaatacttt
ccggataatgcagttgagtattttgtgtcatattatgattattatcaaccagaagcgtat
gttgccgcatcagatacctatatagaaaaagattcatctgtaaatgagcatattgaacaa
atgcgtttgtcagcaaccaaggcaatacttgaacgaaatgatgtaataattgttgcaact
gtgtcagctatatatggtctaggtgatcctgagcagtatatgcaaatgcttttgcaccta
aaggtaggcgaagagttaggactaaaaaaggcgcaaactaagctagtagagatgcaatat
tcacgtaatgatatggattttagtcgtggaagctttcgcgtgcgtggagaggttttagat
attttccctgcagactctgagaaagatgctattcgagtagaattttttgatgatgaaata
gaagcaataagtgtaattgattcattaacctcaaaaaaactcaaatcattacatcgagca
acaattttccctagtactcattatgtggcatctaaagaacgtaaagagatagttattgag
gaaatcaaaaaagaacttaaagaaagagttaagtattttgaaaaagagggaaaacttctt
gaagctcaaagaatagagcaacgtacgaaatatgatattgagatgattcaggaacttggc
tactgtacaggaatcgaaaattactcaaggttactttctggaagagctcctggtgatcca
ccacctactttgattgattatctcccagagaatgccttagtgatagttgacgagtcacac
gtgacattaccgcagtttggaggaatgtataagggtgatttatctcgtaaatcaaacctt
gtaaactatggttttcgtcttccttctgctttagataataggcctttgaaatttaatgag
tttgagagtctgttgcctcagacaatctatgtatcggctacacctgctaattatgagcta
gaaaagtctcaaaatactgtacagcaagtgattagaccaactggtttattagatccggaa
gtttttgtaagaccagtagcgatacaggtagaagatgctttatctgagataaataaagca
attgctaaagaagaaagagttttgataacaactttaaccaaaaaaatggcagaaaacctt
acagagtatttatctgagcatggggttaatgtcagatacttacattcagatattgatact
gtcgaaagggtacagattattcatgatttacgccatggtgtttttgatgtgcttgtcggg
attaaccttcttagggaaggtcttgatatgccagaagttggagttttattaatttttgat
gcagataaagaaggtttcttacgttctgaaaaatctttaattcagacgattggacgtgta
gcaagaaatcaaaatggtcgagctattttatatgctgatgtagtgacaaaatctatgcaa
aaagctatggatgagactttgcgccgtcgtaaactccaagatgaatataatcaaaaacac
aatatagttccaaaaactattattaagaatattgatgatatgctagacagctctccagag
atgcaaaagtgcgcttataaaaataatttgcgcttaaaggttgatgatgttgatgtttcg
gctatactaggtatgactgaagctacgaaggttatcaaagctctcgaaaagcgtatgcga
gcttatgcaaaagagctcgaatttgaaaaagctacaactattagagacaagataactgaa
ataaagcagaagtttattaacttataa
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