Francisella tularensis subsp. novicida U112: FTN_1356
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Entry
FTN_1356 CDS
T00432
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ftn
Francisella tularensis subsp. novicida U112
Pathway
ftn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ftn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FTN_1356 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ftn03400
]
FTN_1356 (recD)
Enzymes [BR:
ftn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FTN_1356 (recD)
DNA repair and recombination proteins [BR:
ftn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FTN_1356 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
AAA_11
UvrD_C_2
UvrD-helicase
NAT10_TcmA_helicase
SLFN-g3_helicase
SH3_13
UvrD_C
AAA_22
ResIII
DEAD
PhoH
nSTAND3
Flavi_DEAD
RecD_N
NACHT
TrwB_AAD_bind
AAA_12
SRP54
ATP-synt_ab
PIF1
TIP49
AAA_24
AAA_7
AAA
AAA_28
Terminase_6N
AAA_33
T2SSE
FtsK_SpoIIIE
CbiA
Motif
Other DBs
NCBI-ProteinID:
ABK90231
UniProt:
A0Q7L6
LinkDB
All DBs
Position
complement(1433559..1435358)
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AA seq
599 aa
AA seq
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MLVYLMEMIMYKTFHKACEQLADIRAIDFFFAKEVFDLVKKTTPSMTTLSSESYPPLHGA
KGNDLEQKSNEILFHILMKLMHVYSHGHSCLKIADISNKTIFASEQSNQSDAKVGFKMPS
SDKIANILDSLNYDNLPIYFAKQYDSLYIKRLWNYENEIANFIKLKTIQNTQKDNRIEEV
VDKLFEPAGEINWQKQAVIKSLNYNFSIISGGPGTGKTTTVAKLLLAIQMLNQNQQRIAL
LAPTGKAAQRMTESLNSVLSKRVDNDSYLGLSNLEAQTIHRFLGLRPNSTHVKYSKQSKA
PYDVIIVDEASMLDMNIFIKLIRAVADNTKLILIGDTNQLPSVEAGSLLANFTHDKYGSI
TPYTTLLIKNYRSQQYINNLAASVLKGDVNIDSHQNENINFHSLRNLDTYLREYAKRYSQ
LEKCRNYKEALTELNKFRILVANKNLEIGTDKLNQKIEKFMSKPIDSNYKGKPIMITQNS
YSLGLFNGDVGIIWPDDTGKLRAYFDGKDAKAFSLNMLPKYESVYAMTIHKTQGSEFDEI
VIILPAEDNEALSKQLLYTAITRAKYKLTIISEQSSLRDIAQKDIKRNSNISELVSLSD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
ttgctagtttatttaatggagatgataatgtataaaactttccataaagcttgtgagcaa
ttagcagatattagagccatagattttttctttgctaaagaggtgtttgatttagtcaaa
aagactactccgtctatgaccactttatcaagtgagtcatatccaccccttcacggagca
aaggggaatgatttggaacaaaaaagtaatgaaattttatttcatattctgatgaaactt
atgcatgtatatagccatggtcatagctgtttgaagatagcagatatatcaaataaaact
atttttgcttcagagcaaagtaatcagagtgatgctaaagtagggtttaaaatgccaagc
tctgataaaattgcaaatattttagatagcttaaattacgataatttacctatatatttt
gccaaacagtatgattctttgtatattaaaagattgtggaattatgagaatgaaatagct
aactttataaaattaaaaacaatccaaaatactcaaaaagacaatcgtattgaagaagtt
gtagacaaactatttgaacctgctggtgaaatcaactggcagaaacaggcagttatcaaa
agtctaaattataattttagtattatctcaggtggaccaggtacaggtaagacaactaca
gtcgcaaagcttttacttgctatacaaatgcttaatcaaaatcagcaaagaatagcgctt
ttagcaccaactggtaaggctgctcagagaatgacagaatccttaaatagtgtattaagt
aaaagggtagacaatgatagttatttggggttatctaatttagaagctcaaactatacat
aggtttttaggcttaagaccaaactctactcatgtgaaatatagcaagcagtcaaaagca
ccatacgatgtgattattgttgatgaagcttcgatgcttgatatgaatatttttattaag
ttgattagagcagtagctgataataccaagctaattttgataggtgatactaatcagtta
ccatctgttgaggctgggagtcttttagcaaactttacacatgataaatatggtagcatt
acgccatatacaacattacttatcaaaaactatcggtcacaacaatatataaataatctt
gcagcctcagtcctaaaaggcgatgttaatattgatagtcatcaaaatgagaatattaat
tttcatagtttaagaaatttagatacttatttaagagagtatgcaaagagatactcacag
cttgaaaagtgccgtaactacaaagaggctcttaccgagctaaataaatttagaatactt
gtggctaacaaaaacctagaaattggtacagataagttaaatcagaaaattgagaagttt
atgtctaagcctatagattctaactataagggtaaaccaattatgataactcaaaatagt
tattcattagggttatttaatggagatgtagggattatctggcctgatgatactggtaag
ctccgagcatattttgatggtaaagatgctaaggcatttagtctaaatatgctaccaaaa
tatgaaagtgtttatgcgatgacaattcataaaactcaaggctcagagtttgatgaaatc
gtgattattcttccagcagaagataatgaagcgctaagtaaacaacttttgtatacagct
atcactagagcaaaatataaattaacgattatatctgaacaaagtagcttaagagatatt
gctcagaaagatattaagagaaattcaaatatcagtgaattagttagcttgagtgattaa
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