Francisella tularensis subsp. novicida U112: FTN_1538
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Entry
FTN_1538 CDS
T00432
Symbol
groEL
Name
(GenBank) chaperonin GroEL (HSP60 family)
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ftn
Francisella tularensis subsp. novicida U112
Pathway
ftn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ftn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FTN_1538 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ftn03019
]
FTN_1538 (groEL)
03110 Chaperones and folding catalysts [BR:
ftn03110
]
FTN_1538 (groEL)
03029 Mitochondrial biogenesis [BR:
ftn03029
]
FTN_1538 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ftn04147
]
FTN_1538 (groEL)
Enzymes [BR:
ftn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FTN_1538 (groEL)
Messenger RNA biogenesis [BR:
ftn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FTN_1538 (groEL)
Chaperones and folding catalysts [BR:
ftn03110
]
Heat shock proteins
HSP60 / Chaperonin
FTN_1538 (groEL)
Mitochondrial biogenesis [BR:
ftn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FTN_1538 (groEL)
Exosome [BR:
ftn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FTN_1538 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
FTN_1538 (groEL)
Exosomal proteins of breast cancer cells
FTN_1538 (groEL)
Exosomal proteins of colorectal cancer cells
FTN_1538 (groEL)
Exosomal proteins of bladder cancer cells
FTN_1538 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Lar_N
Motif
Other DBs
NCBI-ProteinID:
ABK90403
UniProt:
A0Q838
LinkDB
All DBs
Position
complement(1636881..1638515)
Genome browser
AA seq
544 aa
AA seq
DB search
MAAKQVLFSDEARAKMLDGVNTLANAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAKEI
ELEDKFENMGAQIVKEVASKTADVAGDGTTTATVLAQALLTEGLKAVAAGMNPMDLKRGI
DKATAKLVEELKALSKPCSDPKSIEQVGTISANSDATVGKLIADAMAKVGKEGVITVEEG
KGFEDELDVVEGMQFDRGYLSPYFATNQENMTTDLENPYILIVDKKISNIRDLLPVLEGV
SKSGRALLIIAEDVESEALATLVVNNMRGVVKVCAVKAPGFGDRRKAMLEDIATLTGATF
VSEDLSMKLEETNMEHLGTASRVQVTKDNTTIIDGAGEKEAIAKRINVIKANIAEANSDY
DREKLQERLAKLSGGVAVIKVGAVTEAEMKEKKDRVDDALHATRAAVEEGIVAGGGVALI
RAQKALDGLTGENDDQNHGIALLRKAIEAPLRQIVSNAGGESSVVVNQVKANQGNYGYNA
ANDTYGDMVEMGILDPTKVTRSALQHAASIAGLMITTEAMVGEIKEAAPAMPMGGGMGGM
PGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaacaagttttattttcagatgaagctcgtgcaaaaatgctagatggtgtt
aacacactagcaaatgctgtaaaagttactttaggtccaaaaggtcgtaatgttgtttta
gataaatcatttggcgcgccaactatcactaaagatggtgtatctgttgctaaagaaatt
gaactagaagataagtttgagaatatgggtgctcagatagttaaggaagtagcttcaaag
acagctgatgttgctggtgatggtactactacagctactgtacttgctcaggcattatta
acagaaggtctaaaagctgttgctgcgggtatgaatcctatggatctaaaaagaggtatc
gacaaagcaactgctaagttagttgaagaattaaaagcactttctaaaccatgttcagat
ccaaaatcaattgagcaagttggtactatctctgctaactctgatgctactgtaggtaag
cttatcgctgatgcaatggcaaaagttggtaaagaaggtgtgattacagttgaagaaggc
aaaggctttgaagatgagcttgatgtagttgaaggtatgcagtttgatagaggttatcta
tctccgtattttgcaacaaatcaagagaatatgactactgatttagagaatccatatatt
ctaatagttgataagaagatctctaatatccgcgatttattaccggtattagaaggtgtt
tctaaatctggtagagcgttactaataatagctgaagatgtagaaagtgaagctctagct
actttagttgtaaataatatgcgtggcgtagttaaagtatgtgctgtcaaagctcctggc
tttggtgatagaagaaaagctatgctagaagatatcgctaccctaactggagctacgttt
gtatcagaagacctaagcatgaagttagaagaaactaacatggagcatttaggtacggct
agtagagtacaagtaacaaaagataatacaacaattattgatggtgctggtgaaaaagaa
gctatcgctaaacgaataaatgtaatcaaagctaatattgctgaagctaactctgattat
gatcgtgagaagctgcaagaaagattggctaaactttctggcggtgttgcggttatcaaa
gttggcgctgttacagaagctgagatgaaagagaagaaagatcgtgtcgatgatgcttta
catgctactcgtgcggctgtagaagaaggtattgttgctggtggtggcgttgctttaatt
agagcacaaaaagcattagatggcttaacaggtgaaaatgacgatcaaaaccatggtata
gcgttacttagaaaggcaatagaagctcctctaagacagatagtatcaaatgctggcggt
gagtcttctgtagttgttaaccaagttaaagctaatcaaggtaactatggttataatgct
gcaaatgatacttatggtgatatggttgagatgggtattttagatcctactaaagttacg
cgttcagctctgcaacatgctgcttcaattgctggtcttatgattacaacagaggctatg
gttggtgaaatcaaagaagctgctccagctatgcctatgggcggtggcatgggcggtatg
ccgggcatgatgtaa
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