Francisella tularensis subsp. holarctica PHIT-FT049: X557_03580
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Entry
X557_03580 CDS
T03033
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
fto
Francisella tularensis subsp. holarctica PHIT-FT049
Pathway
fto03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
X557_03580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fto03400
]
X557_03580
Enzymes [BR:
fto01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
X557_03580
DNA repair and recombination proteins [BR:
fto03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
X557_03580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
Lys
Cucumo_coat
Helicase_RecD
bMERB_dom
ResIII
Motif
Other DBs
NCBI-ProteinID:
AHH46163
LinkDB
All DBs
Position
650294..653947
Genome browser
AA seq
1217 aa
AA seq
DB search
MDNLNANTITLQGRHIIEASAGTGKTFNITKLYIRLLLEKKLLPSNILVMTFTKDATQEI
IGRVEKEIRDVLASYTDEKKESDKENYKHLKRSLLEIDEAAIFTIHGFCKKVLSEQAFAS
GIEMDVSMEVDTSDIFQKVVEDFFRKHINKSETNFGYLQIYKLHTPEKFLDDLENIIRSN
YEILTKQAISLDEFKILKKQQLELFINNHDIVDDFLYKLGKGEPQGKRVDEYHRVLEWLK
LDNQTLFPENISIITDGRKISAKLIKPIFIGVKELRDLQQEIKQAQAAQFIRKACLQIRQ
DFAKAKEQKGVLDFDDLITKLCQSVKKSPELVKTLQKQYPVALIDEFQDTDAEQYEILDT
IYPLKNSSSHSHKGRNLLTNGLNLKDTRLREYDSSSDQNDSNLLLLMIGDPKQAIYGFRG
GDIFTYLKAKDSCPEENQWSMDTNWRSTGEMIKAYNRLFYKQDYQSEEEGQIGTNIFSDG
IGYQLVKASPDADKKTKDFDDNFKPINYFYYEVAEDDNKSDIDTNLSLWTVNEITRLLNT
QKVAENDIAILVENGKQAKIIQQALQAKNLSSVYLSQRDNVYHSQEAKEILALMEGINDL
ENKSMLKMALSTSLLGGRADKFISYIDENDVSAWDDEIEKAKSLRQQWHKYGFMAFIMQI
IHENFTQRADSKERIITNILHLAELIKVAENKYKHPNQLIKWYRHQLNNTATSEGELRLE
SDDNLIKIITIHGSKGLEYSVVFIPFACYASTKKFETSNFTKYYDGDLKQTVYKIGKDDS
VKQQADKEVIEELMRLFYVAVTRAEHRCYIGVAKYNNSEKSPLARFLGYQKDDDWLEKIQ
SITANPANQSLLINIADMREFSLKNLSSKDKNSDYDTLKANYISKLENDSWEMLSFSKIS
KSKVQNTALEKEIDEAEDDKTQASDRKLAFRFTASKGADMGNILHNVLEHTDFSLGEIDG
NLLQEQMDRYKVVAAEDFDNLKLWLEECLEAHIPYIDTSFSSSNESIQYGLFDIKDKGFC
LKTIPNSKTLKEAEFYFPVKNENLYKTNILEILQEYRELTKLKTYSHSYVGGNLPTNYQD
LRDTRLREYGNLTNVSNQKIFGMLHGFIDLIFEYEGKFYVADYKSNYLGDTLEDYNQQAM
QEKNQSSFYDLQYLIYSVALDKYLRQNIESYNYEKHFGGVYYFYLRGMKDGYGVYRARPN
LEIINKLASLFNGDDNV
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggacaacctaaacgcaaacacaataactctacaaggtcgccatattatcgaggcaagt
gctggtactggtaagacttttaatattactaagttgtatatccgacttttgctagaaaaa
aaattattgccaagtaatatccttgtaatgacctttaccaaagatgcaacccaagagatt
attggtagagttgaaaaagagattcgagatgtattagcaagttatacagatgagaaaaag
gagtctgacaaagaaaactacaaacatctaaaaagatcattacttgagatagatgaggca
gctatatttactatccatggtttttgtaaaaaagtcttaagtgagcaagcctttgctagc
ggtatcgagatggatgtctctatggaggttgatacttcagatatttttcaaaaggttgta
gaggattttttcagaaaacatatcaataaaagcgaaactaattttggatatttacaaata
tataaattacatactccagagaaatttttagatgaccttgagaatattattaggtctaat
tatgagattttaacaaagcaagctataagcttagacgaatttaagatactcaaaaaacaa
cagttagaattatttattaataatcacgatatcgtagatgatttcttatataaattagga
aaaggtgagccacagggcaagagagtagatgagtatcatagggttttagaatggttgaaa
ttagataatcaaacactattcccagagaatatttctataattacagatggcagaaagata
agtgcaaaactaataaaaccaatttttattggcgtaaaagaattaagagacctgcaacaa
gaaataaaacaagcacaagcagcacaatttatcagaaaagcatgcttgcaaatccgccaa
gattttgcaaaggcaaaagagcaaaagggtgttttagactttgatgatttgattaccaag
ctttgccaaagtgtcaaaaaatcgccagagttagtcaaaactttgcaaaaacaatatcca
gttgctcttatagatgagtttcaagatactgatgctgagcagtatgagatattagatact
atttatcctttgaagaatagtagtagtcattcccacaaaggtaggaatctccttaccaat
ggattaaatttaaaagatacccgcttacgcgagtatgacagtagttctgatcagaacgat
agcaatcttctgctcttaatgataggcgatccaaaacaggcaatttatggctttagaggt
ggagatatcttcacatatctaaaagctaaagatagttgtccagaagaaaatcaatggagt
atggacaccaactggcgttcaactggagagatgataaaagcttataatagacttttttat
aaacaagattatcagtcagaagaagaggggcaaattggaactaatatttttagtgatggt
attggatatcagcttgtcaaagcttcaccggatgctgataaaaaaacaaaagattttgac
gataattttaaacctattaattatttctattatgaagtagccgaagatgataataaaagt
gatattgatacgaatttatcattatggacagtaaatgaaattactagattactaaataca
caaaaagtagcagaaaatgatatagctattttggtagaaaatggcaaacaggcaaagatt
atccaacaagctttgcaagctaaaaatctaagctcagtatacctaagccagcgcgataat
gtctatcacagtcaagaggctaaagagatcttagctcttatggagggtataaatgatctt
gaaaataaatctatgttgaaaatggcattatcgactagtttactcggtggtagagctgat
aagtttattagctatattgatgaaaatgatgtctcagcgtgggatgatgagatagaaaaa
gccaaatctctaaggcaacaatggcataaatatggatttatggcatttattatgcagatt
atacatgagaatttcactcaaagagcagattcaaaagagcgtattattacaaatattctt
catttagcagaacttattaaagtggctgagaataaatataaacaccctaatcaactcatt
aaatggtatcgccaccaactcaacaatacagctacaagtgagggtgaacttagattagaa
agtgatgacaacttgattaagataattacaatccatggatcaaaaggacttgagtattca
gttgtgtttatcccgtttgcttgctatgcaagcacaaagaagtttgagacaagtaatttt
actaaatattatgatggtgacctaaaacaaactgtctacaaaattggcaaagatgatagt
gtgaaacagcaagctgataaagaggttatagaagaattaatgcgtctattttatgtagct
gttacgcgtgcagagcatagatgttatattggggttgcaaaatataataatagcgaaaag
tcaccattagcaagattcttaggttatcaaaaagatgatgattggttagagaagatccaa
agcataacagcaaatcctgctaatcaaagtctactgataaatattgcagatatgcgggaa
tttagtttaaaaaatttatctagcaaagataaaaattctgattatgatactctcaaagca
aattatattagtaaactagaaaatgatagttgggagatgttatctttctcaaaaatatca
aagtcaaaagttcaaaatactgcattagaaaaagaaattgacgaggcagaagatgataaa
actcaagcttcagacagaaagctagcatttagatttacagcttcaaaaggagctgatatg
ggtaatattctgcataatgttttagagcatacagattttagtttaggtgagatagatggt
aatcttttacaagaacaaatggatagatataaagtagttgctgcagaagacttcgataat
cttaaattatggttggaagaatgtttagaagcacatataccttatatagataccagtttt
tctagctcaaatgagagtattcaatatggtttatttgatatcaaggataaaggcttttgc
ttaaaaactatcccaaattcgaaaactctaaaagaggcggagttttattttcctgttaaa
aatgagaatttgtataaaacaaatatattagaaatcttgcaagagtatagagagcttaca
aaactgaagacatatagtcattcctacgtaggtgggaatcttccaactaactaccaagat
ctaagagatacccgcctccgcgagtatggcaatttaactaatgtttcgaatcaaaaaatt
tttggtatgcttcatggttttatagatcttatttttgagtatgagggtaaattttatgtt
gctgattataaatcaaattatctaggtgatactttagaagattataatcagcaggcgatg
caagagaaaaatcaaagtagcttttatgatttacagtatctaatatatagcgttgccttg
gataagtacctgcgacaaaacattgaaagttataattatgaaaagcattttggcggagta
tattatttttatcttagaggtatgaaagatggttatggagtttatcgagctagaccaaat
ttagagattatcaacaaacttgctagtttatttaatggagatgataatgtataa
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