Francisella tularensis subsp. holarctica PHIT-FT049: X557_03995
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Entry
X557_03995 CDS
T03033
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
fto
Francisella tularensis subsp. holarctica PHIT-FT049
Pathway
fto03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
X557_03995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fto03400
]
X557_03995
Enzymes [BR:
fto01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
X557_03995
DNA repair and recombination proteins [BR:
fto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
X557_03995
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
X557_03995
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
X557_03995
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
ExoI_C
MIB_arm
ExoI_SH3
Motif
Other DBs
NCBI-ProteinID:
AHH46230
LinkDB
All DBs
Position
730262..731710
Genome browser
AA seq
482 aa
AA seq
DB search
MFSNQTLLFYDLETSGINNSFDQVLQFAAIRTDLDFNEIERFNFFVKLNPDTTPSPMATI
THHISIAQANTGIAEYQAIRKIHKIINAPGTISIGYNTLGFDDELLRFAFYKNMLPPYSH
QFKNGCSRADLFPIVTCYYLFCNEVLNWPKAINEGGQEKTSLKLENLNQNNNLYSGGRAH
DAITDVIVTVELAKKLRAANPKMWQFLLAKFNKQNDENTLTQLDVGLEVGDRKYKQAIAV
SGIFGSKNNFISAILDLGQHRHYKNQEIFLRLDSCLFSDFIDEFGSLEAEHWRLTLNKKW
GDIPIILPAKTRFVGKLPQERIELIKANKEFIRNNPETFANFVEYVLEYKYPEIENIDTD
AAIYQSDFMSMADERGCDKFHSLAITQKAQMLNQLPKSYYDRAVRIIGRLDFSKLPAKAQ
IEFQDYLNKIVSLDSDELLIDHKGKTRKTLEDIYQEIEDLRMNYDLTEEQQALLYELEEY
LF
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtaatcagactttattattttatgatttagagactagtggtataaataattct
tttgatcaagtattgcaatttgctgcaattaggaccgacttggatttcaatgagattgag
agatttaatttttttgtaaaattaaatcctgacaccacgccatcacctatggcaacaatt
acgcatcatatttctattgctcaagcaaatactggtatagcagaatatcaagcgattcga
aaaattcataaaattatcaatgctccaggaactataagtataggctataatactcttgga
tttgatgatgagcttttgagattcgctttttacaaaaatatgttacctccatatagtcat
cagtttaaaaatggttgctcaagagctgatttgtttccaatagttacatgttattactta
ttctgtaatgaagtattaaactggcctaaggctatcaacgagggtggacaagagaaaact
tctctaaaacttgaaaatttaaatcaaaataacaatctctatagtggcggtagagctcat
gatgctattacagatgtgattgttactgtagaattagctaaaaagctaagagccgcaaat
ccaaagatgtggcagtttttgctagcaaaatttaataagcaaaatgatgaaaatacctta
acacaacttgatgttgggctagaggttggggatcgtaaatataaacaagcaatagctgta
agtggtatatttggctcgaagaataattttatctcggcaatattggatttaggacaacat
cgacactataaaaaccaagagatatttctacgcttagatagttgtctatttagtgatttt
atagatgagttcggcagtcttgaagctgagcattggcgtctaactttaaataaaaaatgg
ggcgatatccctattatcctaccagctaagactcgttttgtcggtaagctgccacaagaa
agaatcgagcttatcaaagctaataaagaatttataagaaataatccagagacttttgct
aactttgttgagtatgttttagaatataaatatcccgagatagaaaatattgacactgat
gcggcaatttatcaaagtgactttatgagtatggctgatgagagaggttgtgataaattt
catagcttggctattacgcaaaaggcacaaatgcttaatcagttaccaaaatcttattat
gacagggctgtgcgtataattggtagattagacttttcaaaattaccagcaaaagctcag
atcgagtttcaagattatttaaataaaattgttagcctagatagtgatgagttgttgatt
gatcacaaaggcaaaactcgtaaaactctggaagatatttatcaggaaatagaagattta
cgtatgaattacgatctaacagaagagcaacaagctttgttgtatgagttagaggagtat
ttgttttaa
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