Francisella tularensis subsp. holarctica PHIT-FT049: X557_06525
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Entry
X557_06525 CDS
T03033
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
fto
Francisella tularensis subsp. holarctica PHIT-FT049
Pathway
fto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
X557_06525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fto03019
]
X557_06525
Enzymes [BR:
fto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
X557_06525
Messenger RNA biogenesis [BR:
fto03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
X557_06525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
MerR-DNA-bind
P-loop_SecA
HI1480
Flavi_DEAD
MoaF_like
Motif
Other DBs
NCBI-ProteinID:
AHH46628
LinkDB
All DBs
Position
complement(1191354..1192679)
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AA seq
441 aa
AA seq
DB search
MKFSDLGLNSLIYNALEKKGYTKPTPIQAQAIPIVLKGNDVMASAQTGTGKTAGFTLPII
QRLLDQPKAQANRIKTLILTPTRELAAQIQEQIQIYAANTHIRSAVIFGGVSINPQMMKL
RKGVEILIATPGRLLDLYSQNAVKFDSLNTFVLDEADRMLDMGFINDLKKIHNLLPKKLQ
TLMFSATFSSEIKNLANEFLNNPQFVSADVVNTTVKKITQKIYTLDKSNKINALISLIKD
QNLHQVLVFSRTKNGANKISEKLNNAGISSSAIHGNKSQTARTKALADFKSNDINVLVAT
DIAARGIDIAQLPCVINLDLSNVAEDYVHRIGRTGRAGQEGLAISLVSADEVESLSNIEH
LIGHLLPREELEGFEATHNVPITSMSHKNKAKKIDEVKIIAAKRAKKNNNNKKPSNKNDF
AKKIRQKIHQNKSVRKPKTKD
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaaattctcagatttaggtttaaattccttaatatataacgctttagaaaagaagggt
tatacaaaaccaactcctattcaagcacaagcgataccaatagttctaaagggtaatgat
gttatggcatcagctcaaacaggaacaggaaaaacagcaggctttacattaccaattatc
caaagacttcttgatcaacccaaagctcaagcaaataggatcaaaacattaatcctaact
cctacaagagagttagcagcacaaatacaagaacaaattcaaatatatgccgcaaataca
catattcgttcagcagtaatatttggtggagtaagtattaatcctcaaatgatgaaatta
cgtaaaggtgtcgagattttgatagctactcctggaagattacttgacttatatagtcaa
aatgctgtcaagtttgatagtttaaatacctttgttttagatgaagcagacagaatgtta
gatatgggtttcattaatgatttaaaaaaaatccataaccttttaccgaaaaagttacaa
acactaatgttctcagcaacattttcatcagagataaaaaatcttgctaatgaatttcta
aataatccccagtttgtatcagctgatgttgtaaatacgacggtcaaaaagattactcag
aaaatttatacattagataaatcaaataaaattaatgcgctaatctcactaataaaagat
cagaatctacatcaagtactagttttctcgcggactaaaaatggagcaaataaaatctcg
gaaaagttaaataatgctggcattagtagtagtgctattcatggtaataaaagtcaaact
gctcgtactaaagctttagctgattttaaatctaatgatataaatgtcttagttgctact
gatattgcagctcgtggaattgatattgcccaacttccttgtgtgataaatcttgattta
tcaaatgtcgctgaagactatgtccatagaataggtagaactggcagagcaggacaagag
ggtttagcaatttctcttgtaagtgctgatgaagtcgaatctttatcaaacattgaacat
ctgatcgggcatcttttaccacgagaggaactagaaggctttgaggcaactcataatgta
cctataacaagtatgtcacacaaaaacaaagctaagaaaatcgatgaagttaagataata
gctgcaaaaagagcaaaaaagaacaataacaacaaaaaaccttctaataagaatgatttt
gctaaaaaaattagacaaaaaatacatcaaaataaaagtgttagaaaaccaaagacaaaa
gattaa
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