Francisella tularensis subsp. holarctica PHIT-FT049: X557_07920
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Entry
X557_07920 CDS
T03033
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fto
Francisella tularensis subsp. holarctica PHIT-FT049
Pathway
fto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
X557_07920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fto03019
]
X557_07920
03016 Transfer RNA biogenesis [BR:
fto03016
]
X557_07920
Enzymes [BR:
fto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
X557_07920
Messenger RNA biogenesis [BR:
fto03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
X557_07920
Transfer RNA biogenesis [BR:
fto03016
]
Prokaryotic type
tRNA degradation factors
X557_07920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
S1_RRP5
KH_2
RecX_HTH2
Motif
Other DBs
NCBI-ProteinID:
AHH46836
LinkDB
All DBs
Position
complement(1455635..1457716)
Genome browser
AA seq
693 aa
AA seq
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MKIFREVFELGNKEIILETGGMARQADGSVTVSCGNNVVLVTTVVKKSVADGTDFFPLSV
HYLEKTYAAGKIPGGFLRREGRPSEEQILISRLIDRSIRPSFPDGFFNEIQIVATVLSYD
GAFSPDILALIGASASLAISGAPYDDVVAGVRVGYTNGKYILNPNKQDLRDSDLDLVVSG
TDDAILMVESEANSLPESVMLGGILYAHKHLKTIINSINRLAKVASKPRIEYFIYQINKF
LKSQIKSQFFGEIKNTYTIASKQERNLKLNAIRKNVLEYIFSSDVDGNEYTEKEILEAFH
DIEKDLVRSNILEGKPRIDGRCTETIRPINVKIGVLPGVHGSALFTRGETQALVVTTLGS
DRDAQLVESLDGIEKCRYMLHYNFPPYSVGECGMVGMAPKRREIGHANLAKRATQAVFPN
EEAYPYVVRVVSEILESNGSSSMATVCGSSLSMMDAGVPIAEPVAGIAMGLIKDGAKYAV
LSDILGDEDHLGDMDFKVAGTRYGVTALQMDIKIKGISREILEQALEQARVGRLHILGIM
NEVIKEHKEAVSDVAPQIHVMNINPAKIKDVVGRGGATVKGIVEKTGAQIDTSDSGEVKV
FAKDKKSMDMAVAMIEEIVAEVEEGQVYKGKIVKLLDSGVFVNLLGSQDGYLPFSEIEQA
GMKTNSLVEGQGLEVLVQNIDRGGRVKLSLVAR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatatttagagaagtttttgaactaggtaacaaagaaataattcttgaaacaggt
ggtatggcacgtcaagcagatgggtcagtgactgtaagttgtgggaataatgttgtattg
gtgacaacagtagttaaaaaatcagtagctgatggtactgacttttttccgttatctgtg
cattatttagagaaaacttacgctgctggtaaaataccgggtggtttcttaagaagagag
ggaagaccttcagaagaacaaattcttatttctaggctaatagacagatctataagacca
tcatttccagatgggttttttaacgaaattcaaatcgttgctacagttttatcttatgat
ggtgctttttcacctgatatactagctttaataggtgcttcggcatctttagcaatatct
ggagcaccttacgatgatgttgttgctggtgtaagagtgggttatacaaatggtaagtat
attcttaatccaaataaacaggatttgagagattcagatctagatctagtagtctctgga
acagatgatgctattttaatggttgaatctgaagctaatagccttccagaatctgttatg
cttggtggtatcttatatgcgcacaagcatttaaaaactattattaactcgattaataga
cttgctaaagtagcatctaaacctcgtatagaatattttatatatcaaatcaacaagttt
cttaaatcacaaattaagtcacaattttttggtgaaattaagaatacctatactatagcg
tcaaagcaagaaagaaacttaaaacttaatgcaattagaaaaaatgttcttgagtatatt
ttctctagtgatgttgatggtaacgagtatactgaaaaagaaatattagaagctttccac
gatattgaaaaagatcttgtaagatcaaatattcttgagggtaaaccaagaatagatggt
agatgtacagagactatccgacctatcaatgtcaaaataggtgttttaccgggggtacat
ggatctgctttatttacacgtggtgagactcaagctttagttgtaactactttaggtagt
gatagagatgcacagcttgtggaatctttagatggcatagagaaatgtcgttatatgttg
cattataactttccaccatattctgtgggagagtgtggtatggttggtatggctccaaag
cgtcgcgagattggtcatgctaacttagctaagcgcgcaactcaagcagtattccctaat
gaagaagcatacccgtatgttgttagagttgtctctgaaattctagagtcaaatggttca
agctctatggcgacagtatgtggttcttctttatcaatgatggatgctggtgtaccaatt
gctgagccagtagcaggtattgctatgggacttattaaagatggtgcaaaatatgctgtg
ttatcagatattctaggcgatgaagatcatttgggtgatatggattttaaagttgctggt
actagatatggtgttacagcattacagatggatattaaaatcaaaggcatctcaagagaa
attcttgagcaagcattagagcaggcaagagtaggtagattacatattctaggaatcatg
aatgaagtaataaaagagcataaagaagctgtatctgatgtggcgccacaaattcatgtg
atgaatataaatcctgctaaaattaaagatgtcgttggtcgaggaggtgctactgtaaaa
ggtatagttgagaagactggtgcacaaattgatactagtgattctggtgaagttaaggtt
tttgctaaagacaaaaaatctatggatatggctgtagcaatgatagaagaaatcgttgca
gaagtggaagaagggcaagtttacaagggcaaaatagttaagcttttagattctggagta
tttgttaatcttcttggtagtcaagatggatatttaccattctctgaaattgaacaagct
ggcatgaaaactaactcgttagtagaaggtcaaggcttagaagttttagttcaaaatatc
gatagaggtggtagagttaaactttctcttgtagcgaggtaa
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