Francisella tularensis subsp. tularensis SCHU S4 NR-28534: RO31_1095
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Entry
RO31_1095 CDS
T03888
Name
(GenBank) helicase conserved C-terminal domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ftq
Francisella tularensis subsp. tularensis SCHU S4 NR-28534
Pathway
ftq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ftq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RO31_1095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ftq03019
]
RO31_1095
Enzymes [BR:
ftq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RO31_1095
Messenger RNA biogenesis [BR:
ftq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RO31_1095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
MerR-DNA-bind
P-loop_SecA
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AKE21493
LinkDB
All DBs
Position
964038..965363
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AA seq
441 aa
AA seq
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MKFSDLGLNSLICSALEKKGYTKPTPIQAQAIPIVLKGNDVMASAQTGTGKTAGFTLPII
QRLLDQPKAQANRIKTLILTPTRELAAQIQEQIQIYAANTHIRSAVIFGGVSINPQMMKL
RKGVEILIATPGRLLDLYSQNAVKFDSLNTFVLDEADRMLDMGFINDLKKIHNLLPKKLQ
TLMFSATFSSEIKNLANEFLNNPQFVSADVVNTTVKKITQKIYTLDKSNKINALISLIKD
QNLHQVLVFSRTKNGANKISEKLNNAGISSSAIHGNKSQTARTKALADFKYNDINVLVAT
DIAARGIDIAQLPCVINLDLSNVAEDYVHRIGRTGRSGQEGLAISLVSADEVESLSNIEH
LIGHLLPREELEGFEATHNVPITSMSHKTKAKKIDEVKIIAAKRAKKNNNNKKPSNKNDF
AKKIRQKIHQNKNVRKPKAKD
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaaattctcagatttaggtttaaattccttaatatgtagcgctttagaaaagaagggt
tatacaaaaccaactcctattcaagcacaagcgataccaatagttctaaagggtaatgat
gttatggcatcagctcaaacaggaacaggaaaaacagcaggctttacattaccaattatc
caaagacttcttgatcaacccaaagctcaagcaaataggatcaaaacattaatcctaact
cctacaagagagttagcagcacaaatacaagaacaaattcaaatatatgccgcaaataca
catattcgttcagcagtaatatttggtggagtgagtattaatcctcaaatgatgaaatta
cgtaaaggtgtcgagattttgatagctactcctggaagattacttgacttatatagtcaa
aatgctgtcaagtttgatagtttaaatacctttgttttagatgaagcagacagaatgtta
gatatgggtttcattaatgatttaaaaaaaatccataaccttttaccgaaaaagttacaa
acactaatgttctcagcaacattttcatcagagataaaaaatcttgctaatgaatttcta
aataatccccagtttgtatcagccgatgttgtaaatacgacggtcaaaaagattactcag
aaaatttatacattagataaatcaaataaaattaatgcgctaatctcactaataaaagat
cagaatctacatcaagtactagttttctcgcggactaaaaatggagcaaataaaatctcg
gaaaagttaaataatgctggcattagtagtagtgctattcatggtaataaaagtcaaact
gctcgtactaaagctttagctgattttaaatataatgatataaatgtcttagttgctact
gatattgcagctcgtggaattgatattgcccaacttccttgtgtgataaatcttgattta
tcaaatgtcgctgaagactatgtccatagaataggtagaactggcagatcaggacaagag
ggtttagcaatttctcttgtaagtgctgatgaagtcgaatctttatcaaacattgaacat
ctgatcgggcatcttttaccacgagaagaactagaaggctttgaggcaactcataatgta
cctataacaagtatgtcacacaaaaccaaagctaagaaaatcgatgaagttaagataata
gctgcaaaaagagcaaaaaagaacaataacaacaaaaaaccttctaataagaatgatttt
gctaaaaaaattagacaaaaaatacatcaaaataaaaatgttagaaaaccaaaggcaaaa
gattaa
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