Francisella tularensis subsp. tularensis NE061598: NE061598_05460
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Entry
NE061598_05460 CDS
T01938
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ftr
Francisella tularensis subsp. tularensis NE061598
Pathway
ftr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ftr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NE061598_05460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ftr03019
]
NE061598_05460
Enzymes [BR:
ftr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NE061598_05460
Messenger RNA biogenesis [BR:
ftr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NE061598_05460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
MerR-DNA-bind
Flavi_DEAD
P-loop_SecA
MoaF_like
Motif
Other DBs
NCBI-ProteinID:
ADA78632
LinkDB
All DBs
Position
964210..965535
Genome browser
AA seq
441 aa
AA seq
DB search
MKFSDLGLNSLICSALEKKGYTKPTPIQAQAIPIVLKGNDVMASAQTGTGKTAGFTLPII
QRLLDQPKAQANRIKTLILTPTRELAAQIQEQIQIYAANTHIRSAVIFGGVSINPQMMKL
RKGVEILIATPGRLLDLYSQNAVKFDSLNTFVLDEADRMLDMGFINDLKKIHNLLPKKLQ
TLMFSATFSSEIKNLANEFLNNPQFVSADVVNTTVKKITQKIYTLDKSNKINALISLIKD
QNLHQVLVFSRTKNGANKISEKLNNAGISSSAIHGNKSQTARTKALADFKYNDINVLVAT
DIAARGIDIAQLPCVINLDLSNVAEDYVHRIGRTGRSGQEGLAISLVSADEVESLSNIEH
LIGHLLPREELEGFEATHNVPITSMSHKTKAKKIDEVKIIAAKRAKKNNNNKKPSNKNDF
AKKIRQKIHQNKNVRKPKAKD
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaaattctcagatttaggtttaaattccttaatatgtagcgctttagaaaagaagggt
tatacaaaaccaactcctattcaagcacaagcgataccaatagttctaaagggtaatgat
gttatggcatcagctcaaacaggaacaggaaaaacagcaggctttacattaccaattatc
caaagacttcttgatcaacccaaagctcaagcaaataggatcaaaacattaatcctaact
cctacaagagagttagcagcacaaatacaagaacaaattcaaatatatgccgcaaataca
catattcgttcagcagtaatatttggtggagtgagtattaatcctcaaatgatgaaatta
cgtaaaggtgtcgagattttgatagctactcctggaagattacttgacttatatagtcaa
aatgctgtcaagtttgatagtttaaatacctttgttttagatgaagcagacagaatgtta
gatatgggtttcattaatgatttaaaaaaaatccataaccttttaccgaaaaagttacaa
acactaatgttctcagcaacattttcatcagagataaaaaatcttgctaatgaatttcta
aataatccccagtttgtatcagccgatgttgtaaatacgacggtcaaaaagattactcag
aaaatttatacattagataaatcaaataaaattaatgcgctaatctcactaataaaagat
cagaatctacatcaagtactagttttctcgcggactaaaaatggagcaaataaaatctcg
gaaaagttaaataatgctggcattagtagtagtgctattcatggtaataaaagtcaaact
gctcgtactaaagctttagctgattttaaatataatgatataaatgtcttagttgctact
gatattgcagctcgtggaattgatattgcccaacttccttgtgtgataaatcttgattta
tcaaatgtcgctgaagactatgtccatagaataggtagaactggcagatcaggacaagag
ggtttagcaatttctcttgtaagtgctgatgaagtcgaatctttatcaaacattgaacat
ctgatcgggcatcttttaccacgagaagaactagaaggctttgaggcaactcataatgta
cctataacaagtatgtcacacaaaaccaaagctaagaaaatcgatgaagttaagataata
gctgcaaaaagagcaaaaaagaacaataacaacaaaaaaccttctaataagaatgatttt
gctaaaaaaattagacaaaaaatacatcaaaataaaaatgttagaaaaccaaaggcaaaa
gattaa
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