Francisella tularensis subsp. holarctica F92: F92_03330
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Entry
F92_03330 CDS
T02349
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
fts
Francisella tularensis subsp. holarctica F92
Pathway
fts03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fts00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F92_03330 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fts03021
]
F92_03330 (rho)
03019 Messenger RNA biogenesis [BR:
fts03019
]
F92_03330 (rho)
Transcription machinery [BR:
fts03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
F92_03330 (rho)
Messenger RNA biogenesis [BR:
fts03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
F92_03330 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
AAA_25
NACHT
AAA
ResIII
AAA_22
DUF3086
Motif
Other DBs
NCBI-ProteinID:
AFX70309
LinkDB
All DBs
Position
complement(598881..599708)
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AA seq
275 aa
AA seq
DB search
MEIGNGSNEDITARVIDLAAPFGKGQRGLIVAPPKTGKTIMMQNIATSIAKNHPECNLIM
LLIDERPEEVTEMQRSVRGEVVASTFDEPAARHVQLAEIVIEKAKRLVEHKQDVVILLDS
ITRLARAYNTVSPASGRVLSGGVEANALQKPKRFFGAARNTAEGGSLTIIATALVETGSK
MDEVIFEEFKGTGNMELHLDRKIAERRVFPAISFDRSGTRREELLTTPEELQKLWVLRKI
LGGMEDVQAMEFLTEKMKGSLTNEEFFETMKRGAI
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggaaattggaaacggctcaaatgaggatattactgctagagttatagatttagcggca
ccatttggtaaaggtcagcgtggcttgattgttgcaccacctaaaactggtaagacaatc
atgatgcaaaatatcgcaacgtctattgccaaaaatcatccagagtgtaatctaatcatg
ctactaattgatgagcgtcctgaggaagttaccgaaatgcaacgctccgtgcgaggtgag
gtagttgcatctacgtttgatgaaccagctgcacgccatgtccaattagctgaaattgta
atcgaaaaagccaaaagattagttgagcacaaacaagatgtagtaatcttacttgactca
atcacaagactagctcgtgcatacaataccgtatctccagcgtctggtcgtgtactatct
ggtggtgtagaggcaaacgccttacaaaaaccaaaaagattctttggtgctgcgcgtaat
actgccgaaggtggtagcttgacaatcattgcaactgctcttgtcgaaactggttcaaaa
atggatgaagttatctttgaagaattcaaaggcacaggtaacatggagcttcatcttgat
cgtaagattgctgagcgccgcgtcttccctgctattagctttgatagatctggtacacgt
agagaagaactacttactactccagaagagctacaaaaactttgggtgctgcgtaagatt
cttggtggtatggaagatgtccaagctatggaattcttaacagagaaaatgaaaggctca
ctaactaatgaagaattctttgaaactatgaaaagaggcgctatttag
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