Francisella tularensis subsp. tularensis SCHU S4: FTT_0121
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Entry
FTT_0121 CDS
T00214
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ftu
Francisella tularensis subsp. tularensis SCHU S4
Pathway
ftu03420
Nucleotide excision repair
ftu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ftu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FTT_0121 (uvrD)
03430 Mismatch repair
FTT_0121 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ftu03400
]
FTT_0121 (uvrD)
Enzymes [BR:
ftu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FTT_0121 (uvrD)
DNA repair and recombination proteins [BR:
ftu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FTT_0121 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
FTT_0121 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
ResIII
DEAD
CarD_TRCF_RID
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CAG44754
UniProt:
Q5NIF1
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All DBs
Position
130986..133208
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AA seq
740 aa
AA seq
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MSNYDFTLGLNPEQQKATLLEDRNALILAGAGSGKTKVLTSRIAYLCRDKGVSIENILAV
TFTNKAAKEIQQRVEKMLGISTFGMWIGTFHGIAHRLLRKHAHELGLDKNFRILDQDEQA
QLVKKVINNLDLDDKKYPPKLLQNFINKQKDKAIRSNKLTKQYDANYAHIYTAYEERLQL
DNALDFADLLLHLYELFSFNQQLREYYQNKFKYILIDEFQDTNHVQYMWLKLLITDNNYM
MAVGDDDQSIYGWRGAVVDNIHNYVKDLKNVEIIKLEQNYRSTKNILKVANSVIKNNDNR
MSKELWSAAEDGEKVVLYCAVNERDEAKYIIDKIRQLHNDGVDYSDIAILYRSNYLSRVL
EESCIYASIPYRIYGGFRFFDRAEIKDALAYLRLAVTNSDNLAFERIINTPTRGIGNKTL
ETIRNYAQINSLSYWQANLDVIQKELVTKRTASLLLKFIELISGISAQINQHSLDKLLES
VINQSGLLASYQEKNSEKDRQKIDNLKELISAAKDFEPQIELLDDNTDILQDFLSFAVLE
AGEMQADEATDSVQLMTIHASKGLEFRYVFLVAAEEGVFPPSSIVNFEEVFDNTSSKKMQ
EKLAEERRLFYVAVTRAMKALTISYAQVRSIFGRSSFQVKSRFVAEIDSQHLSQGKLEFT
AAKPKTKQKANFGMSPFDFLKSNNTTNSFKPGDKVFHKVFGKGVFIKAQAQGTKEFYTVD
FGIDVGQKILLADIANLVKV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtctaattatgactttaccttaggattaaatccagagcagcaaaaagctacattacta
gaggatcgtaatgctttgattctcgctggtgctggcagtggtaaaacaaaagttctaaca
tcacgtatagcttatctttgtcgtgataaaggagtatctatagaaaatatccttgccgta
acattcactaataaagcagcaaaagagattcagcagcgtgtagaaaagatgcttgggatt
tctacatttggaatgtggataggtacttttcatggtattgcacatagactattgcgtaag
catgctcatgaacttggcttagataagaactttaggatacttgatcaagatgagcaggca
caactggttaaaaaggtaatcaataatctagatcttgatgataaaaaatatccgcctaaa
ttactgcagaattttatcaataaacaaaaagataaagctatccgtagtaataaactaaca
aagcagtatgatgccaattatgcgcatatttatacagcttatgaagaaagacttcagctt
gataatgctttggattttgcagatttgcttttacatctttatgagcttttttcttttaat
caacagcttagagaatattatcaaaacaaatttaaatatattttgattgatgagtttcag
gatactaaccatgttcaatacatgtggctaaaattacttataactgataataactacatg
atggcagttggcgatgatgatcagtcaatatatggttggcgtggtgctgtcgtagataat
atccataattatgtaaaagatctcaaaaacgttgagattataaaactagaacaaaactac
cgctcaacaaaaaatattctaaaagtagctaattcagtaatcaaaaataatgataatagg
atgtcaaaggagctgtggtcagcagctgaagatggtgaaaaagtagtgctttattgtgcc
gttaatgagcgtgatgaggcaaaatatattatagataaaattcgccagttgcataatgat
ggagttgactatagtgatatagctatcttatatcgttcaaactatctatcacgtgtttta
gaggaaagttgtatttatgcaagtattccatatcgaatttatggcggttttaggttcttt
gatagagcagagattaaagatgctttagcatacttaagattagctgttacaaatagtgat
aatttagcatttgaacgaattattaacacaccgacacgaggaattggtaataagacatta
gagacaattagaaattatgcgcaaattaattcattatcatattggcaagctaatttagat
gttattcaaaaagagcttgtaactaaaagaacagcaagtttacttttaaagtttatcgaa
ttaattagtggtatttcggcacaaataaatcagcatagcttagataagctcttagaatcg
gtaataaatcaaagtggtcttttagcatcatatcaagaaaaaaatagtgaaaaggatcgc
caaaagattgataacttaaaagagttgataagtgcagctaaagattttgaaccacagata
gagttacttgatgataatactgacatactacaagatttcttgtcatttgctgttctagaa
gctggtgaaatgcaagctgatgaagctacagatagtgtgcagttaatgactattcatgct
tcaaaaggtttagagtttcgttatgtgtttctagttgctgcagaagaaggggtttttcca
ccaagctcaattgttaactttgaagaagtgttcgataatacaagctctaagaaaatgcaa
gagaagcttgctgaagagcgtcgccttttttatgtagcagtaacaagagctatgaaagcc
ttaactataagttatgcacaagtacgcagtatctttggtcgtagtagttttcaagttaag
tcacgtttcgttgcagagatagactctcagcatttgagtcagggtaaactagagtttaca
gcggctaaacctaaaactaaacaaaaagcaaattttgggatgtcgccttttgattttctt
aaatcaaataatactaccaatagttttaaacctggtgataaagtatttcataaggttttt
ggcaaaggagtatttataaaagcgcaagcacaagggacaaaagagttttatactgtagac
tttggtatagatgttggtcagaaaatattgctagcagatatcgctaatctggttaaggtc
tga
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